Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1991

Experiment: KB with Berberine 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 250 ug/ml
2,311,035	+		Psyr_1990	0.34	-0.2
2,311,035	+		Psyr_1990	0.34	+0.6
2,311,036	-		Psyr_1990	0.34	-0.8
2,311,036	-		Psyr_1990	0.34	-0.3
2,311,036	-		Psyr_1990	0.34	-1.0
2,311,036	-		Psyr_1990	0.34	+0.5
2,311,036	-		Psyr_1990	0.34	-1.0
2,311,037	+		Psyr_1990	0.34	-0.6
2,311,037	+		Psyr_1990	0.34	-0.6
2,311,037	+		Psyr_1990	0.34	-0.0
2,311,037	+		Psyr_1990	0.34	+0.4
2,311,038	-		Psyr_1990	0.34	-0.6
2,311,038	-		Psyr_1990	0.34	-0.2
2,311,165	-		Psyr_1990	0.44	-0.6
2,311,174	-		Psyr_1990	0.45	-1.5
2,311,338	+		Psyr_1990	0.57	+0.6
2,311,338	+		Psyr_1990	0.57	+0.3
2,311,338	+		Psyr_1990	0.57	+0.2
2,311,338	+		Psyr_1990	0.57	-0.5
2,311,339	-		Psyr_1990	0.57	-2.2
2,311,339	-		Psyr_1990	0.57	-1.1
2,311,339	-		Psyr_1990	0.57	-0.2
2,311,339	-		Psyr_1990	0.57	-0.6
2,311,339	-		Psyr_1990	0.57	-0.4
2,311,398	+		Psyr_1990	0.62	+1.4
2,311,399	-		Psyr_1990	0.62	-1.8
2,311,399	-		Psyr_1990	0.62	-0.0
2,311,531	+		Psyr_1990	0.72	-0.6
2,311,532	-		Psyr_1990	0.72	+0.2
2,311,818	-				+0.2
2,311,818	-				-1.2
2,311,818	-				-1.3
2,311,818	-				-2.5
2,311,821	+				+0.5
2,311,821	+				-1.1
2,311,821	+				+0.6
2,311,821	+				+0.6
2,311,821	+				-0.4
2,311,821	+				-0.3
2,311,821	+				-1.5
2,311,821	+				+0.3
2,311,822	-				-1.0
2,311,822	-				+0.7
2,311,822	-				+0.5
2,311,822	-				+2.0
2,311,822	-				-0.6
2,311,822	-				+1.3
2,311,822	-				-0.5
2,311,822	-				-2.4
2,311,822	-				-1.6
2,311,822	-				-0.0
2,311,822	-				-0.0
2,311,822	-				+0.1
2,311,825	+				+1.1
2,311,825	+				+0.8
2,311,825	+				-1.0
2,311,857	+				-0.4
2,311,857	+				+0.5
2,311,857	+				-1.7
2,311,857	+				-0.6
2,311,858	-				-1.0
2,311,858	-				-0.8
2,311,858	-				-0.9
2,311,858	-				+0.4
2,311,858	-				-0.2
2,311,858	-				+0.4
2,311,858	-				+1.2
2,311,984	-				-2.0
2,312,136	+		Psyr_1991	0.20	-1.2
2,312,281	+		Psyr_1991	0.37	-2.2
2,312,578	+		Psyr_1991	0.74	-0.6
2,312,578	+		Psyr_1991	0.74	+0.5
2,312,578	+		Psyr_1991	0.74	+0.3
2,312,578	+		Psyr_1991	0.74	-0.0
2,312,578	+		Psyr_1991	0.74	-0.4
2,312,578	+		Psyr_1991	0.74	-0.8
2,312,578	+		Psyr_1991	0.74	-0.0
2,312,579	-		Psyr_1991	0.74	+0.4
2,312,579	-		Psyr_1991	0.74	-1.7
2,312,579	-		Psyr_1991	0.74	-1.6
2,312,579	-		Psyr_1991	0.74	-0.4
2,312,579	-		Psyr_1991	0.74	-0.5
2,312,579	-		Psyr_1991	0.74	-0.0
2,312,579	-		Psyr_1991	0.74	-0.0
2,312,582	+		Psyr_1991	0.75	-0.3
2,312,582	+		Psyr_1991	0.75	+1.0
2,312,582	+		Psyr_1991	0.75	-1.4
2,312,582	+		Psyr_1991	0.75	-0.0
2,312,582	+		Psyr_1991	0.75	+1.0
2,312,582	+		Psyr_1991	0.75	-0.0
2,312,582	+		Psyr_1991	0.75	-1.4
2,312,582	+		Psyr_1991	0.75	+1.0
2,312,582	+		Psyr_1991	0.75	-1.6
2,312,582	+		Psyr_1991	0.75	+1.4
2,312,582	+		Psyr_1991	0.75	-1.1
2,312,583	-		Psyr_1991	0.75	-0.8
2,312,583	-		Psyr_1991	0.75	+0.5
2,312,583	-		Psyr_1991	0.75	-0.8
2,312,583	-		Psyr_1991	0.75	-2.2
2,312,583	-		Psyr_1991	0.75	-0.8
2,312,583	-		Psyr_1991	0.75	-0.6
2,312,704	+		Psyr_1991	0.90	-1.6
2,312,704	+		Psyr_1991	0.90	+1.0
2,312,705	-		Psyr_1991	0.90	-1.1
2,312,705	-		Psyr_1991	0.90	-1.2
2,312,867	-				+0.4
2,313,359	-		Psyr_1992	0.53	+0.5
2,313,506	-		Psyr_1992	0.67	-0.9
2,313,616	+		Psyr_1992	0.78	+0.4