Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1949

Experiment: KB with Berberine 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 250 ug/ml
2,233,374	+				-0.5
2,233,663	+				-0.6
2,233,663	+		Psyr_1948	0.30	+0.4
2,233,663	+		Psyr_1948	0.30	-0.0
2,233,701	-		Psyr_1948	0.34	-1.4
2,233,747	-		Psyr_1948	0.39	-1.2
2,233,850	+		Psyr_1948	0.50	-0.0
2,233,967	+		Psyr_1948	0.63	-0.0
2,233,968	-		Psyr_1948	0.63	-0.9
2,234,161	-		Psyr_1948	0.84	+0.4
2,234,161	-		Psyr_1948	0.84	-0.0
2,234,177	-		Psyr_1948	0.86	-0.8
2,234,291	+				+0.5
2,234,291	+				-1.4
2,234,292	-				+1.0
2,234,292	-				-3.0
2,234,295	+				+0.3
2,234,295	+				-0.6
2,234,309	-				-0.3
2,234,615	-		Psyr_1949	0.34	-0.0
2,234,689	+		Psyr_1949	0.42	+0.4
2,234,854	-		Psyr_1949	0.61	-1.6
2,234,912	-		Psyr_1949	0.67	-0.3
2,234,959	+		Psyr_1949	0.72	-1.6
2,234,971	+		Psyr_1949	0.74	-0.5
2,234,972	-		Psyr_1949	0.74	-0.6
2,235,721	-		Psyr_1950	0.67	+0.3
2,236,056	-				-1.0
2,236,056	-				+0.7
2,236,115	+		Psyr_1951	0.16	+0.4
2,236,116	-		Psyr_1951	0.16	-0.4
2,236,116	-		Psyr_1951	0.16	-0.0