Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1764

Experiment: KB with Berberine 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 250 ug/ml
2,004,313	+		Psyr_1762	0.56	-1.3
2,004,314	-		Psyr_1762	0.56	-1.5
2,004,322	+		Psyr_1762	0.57	-1.1
2,004,322	+		Psyr_1762	0.57	-1.1
2,004,322	+		Psyr_1762	0.57	-2.3
2,004,322	+		Psyr_1762	0.57	-1.7
2,004,322	+		Psyr_1762	0.57	-0.8
2,004,322	+		Psyr_1762	0.57	-1.5
2,004,322	+		Psyr_1762	0.57	-0.5
2,004,323	-		Psyr_1762	0.57	-2.0
2,004,323	-		Psyr_1762	0.57	-1.2
2,004,323	-		Psyr_1762	0.57	-0.7
2,004,522	+		Psyr_1762	0.83	-2.7
2,004,522	+		Psyr_1762	0.83	-1.2
2,004,522	+		Psyr_1762	0.83	+0.3
2,004,522	+		Psyr_1762	0.83	-1.3
2,004,522	+		Psyr_1762	0.83	-1.0
2,004,522	+		Psyr_1762	0.83	-0.3
2,004,522	+		Psyr_1762	0.83	-0.2
2,004,522	+		Psyr_1762	0.83	-1.8
2,004,522	+		Psyr_1762	0.83	-1.8
2,004,522	+		Psyr_1762	0.83	-1.1
2,004,522	+		Psyr_1762	0.83	+0.6
2,004,522	+		Psyr_1762	0.83	-0.7
2,004,522	+		Psyr_1762	0.83	-0.9
2,004,522	+		Psyr_1762	0.83	-0.7
2,004,522	+		Psyr_1762	0.83	-1.0
2,004,522	+		Psyr_1762	0.83	-0.5
2,004,522	+		Psyr_1762	0.83	+0.3
2,004,522	+		Psyr_1762	0.83	-0.9
2,004,522	+		Psyr_1762	0.83	-0.7
2,004,522	+		Psyr_1762	0.83	-0.7
2,004,522	+		Psyr_1762	0.83	-1.3
2,004,522	+		Psyr_1762	0.83	-0.7
2,004,522	+		Psyr_1762	0.83	-0.9
2,004,523	-		Psyr_1762	0.83	+0.2
2,004,523	-		Psyr_1762	0.83	+0.8
2,004,523	-		Psyr_1762	0.83	-0.7
2,004,523	-		Psyr_1762	0.83	-0.4
2,004,523	-		Psyr_1762	0.83	-1.1
2,004,523	-		Psyr_1762	0.83	+0.5
2,004,523	-		Psyr_1762	0.83	-0.7
2,004,523	-		Psyr_1762	0.83	-1.1
2,004,523	-		Psyr_1762	0.83	-1.7
2,004,523	-		Psyr_1762	0.83	-0.1
2,004,523	-		Psyr_1762	0.83	-1.1
2,004,526	+		Psyr_1762	0.84	+0.5
2,004,526	+		Psyr_1762	0.84	-0.7
2,004,526	+		Psyr_1762	0.84	+0.9
2,004,526	+		Psyr_1762	0.84	-1.3
2,004,526	+		Psyr_1762	0.84	-1.7
2,004,526	+		Psyr_1762	0.84	-0.1
2,004,527	-		Psyr_1762	0.84	-1.5
2,004,527	-		Psyr_1762	0.84	+0.3
2,004,632	+				-0.5
2,005,197	+				+1.7
2,005,197	+				-0.2
2,005,197	+				-0.1
2,005,197	+				+0.1
2,005,197	+				-1.1
2,005,197	+				+1.9
2,005,197	+				+0.7
2,006,072	+				+1.0
2,006,072	+				+1.5
2,006,072	+				+0.3
2,006,072	+				+0.5
2,006,073	-				-1.0
2,006,073	-				+1.5
2,006,073	-				-0.9
2,006,073	-				+0.1
2,006,073	-				+0.8
2,006,098	+		Psyr_1765	0.14	-0.3
2,006,098	+		Psyr_1765	0.14	-0.7
2,006,183	+		Psyr_1765	0.30	+0.1
2,006,275	+		Psyr_1765	0.46	-0.5
2,006,310	-		Psyr_1765	0.53	-1.0
2,006,457	+		Psyr_1765	0.79	+0.0
2,006,458	-		Psyr_1765	0.80	+1.2
2,006,460	-		Psyr_1765	0.80	-0.5
2,006,474	+		Psyr_1765	0.83	+1.6
2,006,474	+		Psyr_1765	0.83	+1.6
2,006,616	+				+0.2
2,006,617	-				-0.6
2,006,617	-				+0.9
2,006,710	-		Psyr_1766	0.44	+0.3
2,006,856	+				+1.2
2,006,856	+				+0.5
2,006,857	-				-0.1
2,006,858	+				-0.1
2,006,858	+				+0.9
2,006,858	+				+0.3
2,006,858	+				+0.1
2,006,859	-				-0.3
2,006,859	-				-0.3
2,006,859	-				-1.5
2,006,859	-				+0.1
2,006,859	-				-1.1
2,006,890	+				+0.1
2,006,890	+				+0.7
2,006,891	-				-0.2
2,006,903	+				+0.4
2,006,903	+				-0.9
2,006,904	-				-0.4
2,006,904	-				-0.9
2,006,904	-				-1.3
2,006,904	-				+0.0
2,006,904	-				+1.1
2,006,904	-				+1.1
2,006,904	-				-1.4
2,006,905	+				-0.9
2,006,905	+				-0.6
2,006,906	-				+0.1
2,006,906	-				-1.3
2,006,933	+				+1.5