Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23750 and HSERO_RS23755 are separated by 92 nucleotides HSERO_RS23755 and HSERO_RS23760 are separated by 259 nucleotides HSERO_RS23760 and HSERO_RS23765 are separated by 170 nucleotides HSERO_RS23765 and HSERO_RS23770 are separated by 15 nucleotides
HSERO_RS23750: HSERO_RS23750 - flagellar L-ring protein, at 5,444,223 to 5,444,888
_RS23750
HSERO_RS23755: HSERO_RS23755 - cell division protein FtsI, at 5,444,981 to 5,445,556
_RS23755
HSERO_RS23760: HSERO_RS23760 - hypothetical protein, at 5,445,816 to 5,446,235
_RS23760
HSERO_RS23765: HSERO_RS23765 - hypothetical protein, at 5,446,406 to 5,446,732
_RS23765
HSERO_RS23770: HSERO_RS23770 - hypothetical protein, at 5,446,748 to 5,448,094
_RS23770
Position (kb) 5445
5446
5447 Strain fitness (log2 ratio) -1
0
1 at 5445.042 kb on + strand, within HSERO_RS23755 at 5445.101 kb on - strand, within HSERO_RS23755 at 5445.140 kb on - strand, within HSERO_RS23755 at 5445.161 kb on + strand, within HSERO_RS23755 at 5445.451 kb on + strand, within HSERO_RS23755 at 5445.608 kb on + strand at 5445.621 kb on - strand at 5445.682 kb on - strand at 5445.754 kb on + strand at 5445.762 kb on - strand at 5445.774 kb on - strand at 5445.917 kb on - strand, within HSERO_RS23760 at 5446.065 kb on + strand, within HSERO_RS23760 at 5446.068 kb on - strand, within HSERO_RS23760 at 5446.083 kb on - strand, within HSERO_RS23760 at 5446.223 kb on + strand at 5446.281 kb on - strand at 5446.302 kb on + strand at 5446.557 kb on - strand, within HSERO_RS23765 at 5446.598 kb on + strand, within HSERO_RS23765 at 5446.656 kb on + strand, within HSERO_RS23765 at 5446.727 kb on + strand at 5446.735 kb on - strand at 5446.861 kb on + strand at 5447.010 kb on + strand, within HSERO_RS23770
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 5,445,042 + HSERO_RS23755 0.11 +1.2 5,445,101 - HSERO_RS23755 0.21 +0.3 5,445,140 - HSERO_RS23755 0.28 +1.7 5,445,161 + HSERO_RS23755 0.31 +0.4 5,445,451 + HSERO_RS23755 0.82 +0.5 5,445,608 + -0.9 5,445,621 - -0.8 5,445,682 - +1.7 5,445,754 + +0.4 5,445,762 - -0.8 5,445,774 - +0.9 5,445,917 - HSERO_RS23760 0.24 +0.1 5,446,065 + HSERO_RS23760 0.59 +0.6 5,446,068 - HSERO_RS23760 0.60 +1.5 5,446,083 - HSERO_RS23760 0.64 +0.2 5,446,223 + +0.3 5,446,281 - -0.1 5,446,302 + +0.3 5,446,557 - HSERO_RS23765 0.46 -0.7 5,446,598 + HSERO_RS23765 0.59 +0.3 5,446,656 + HSERO_RS23765 0.76 -0.1 5,446,727 + -0.5 5,446,735 - -0.8 5,446,861 + -0.1 5,447,010 + HSERO_RS23770 0.19 +1.6
Or see this region's nucleotide sequence