Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21495 and HSERO_RS21500 are separated by 119 nucleotides HSERO_RS21500 and HSERO_RS21505 are separated by 54 nucleotides HSERO_RS21505 and HSERO_RS21510 overlap by 4 nucleotides
HSERO_RS21495: HSERO_RS21495 - acetylglutamate kinase, at 4,920,006 to 4,920,899
_RS21495
HSERO_RS21500: HSERO_RS21500 - hypothetical protein, at 4,921,019 to 4,921,798
_RS21500
HSERO_RS21505: HSERO_RS21505 - pantothenate kinase, at 4,921,853 to 4,922,629
_RS21505
HSERO_RS21510: HSERO_RS21510 - biotin--[acetyl-CoA-carboxylase] synthetase, at 4,922,626 to 4,923,513
_RS21510
Position (kb) 4921
4922 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4921.045 kb on - strand at 4921.070 kb on + strand at 4921.101 kb on - strand, within HSERO_RS21500 at 4921.306 kb on + strand, within HSERO_RS21500 at 4921.314 kb on - strand at 4921.375 kb on + strand, within HSERO_RS21500 at 4921.401 kb on - strand, within HSERO_RS21500 at 4921.411 kb on + strand, within HSERO_RS21500 at 4921.419 kb on - strand, within HSERO_RS21500 at 4921.502 kb on - strand, within HSERO_RS21500 at 4921.822 kb on + strand at 4922.642 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 4,921,045 - +0.7 4,921,070 + +3.1 4,921,101 - HSERO_RS21500 0.11 +1.6 4,921,306 + HSERO_RS21500 0.37 +1.1 4,921,314 - -0.9 4,921,375 + HSERO_RS21500 0.46 +1.3 4,921,401 - HSERO_RS21500 0.49 -0.1 4,921,411 + HSERO_RS21500 0.50 +1.1 4,921,419 - HSERO_RS21500 0.51 -0.3 4,921,502 - HSERO_RS21500 0.62 +0.5 4,921,822 + -0.1 4,922,642 + -2.6
Or see this region's nucleotide sequence