Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03080 and HSERO_RS03085 are separated by 95 nucleotides HSERO_RS03085 and HSERO_RS03090 are separated by 7 nucleotides
HSERO_RS03080: HSERO_RS03080 - molecular chaperone DnaJ, at 674,563 to 675,690
_RS03080
HSERO_RS03085: HSERO_RS03085 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 675,786 to 676,613
_RS03085
HSERO_RS03090: HSERO_RS03090 - deoxyadenosine kinase, at 676,621 to 677,262
_RS03090
Position (kb) 675
676
677 Strain fitness (log2 ratio) -2
-1
0
1
2 at 675.582 kb on - strand at 675.892 kb on + strand, within HSERO_RS03085 at 676.100 kb on + strand, within HSERO_RS03085 at 676.132 kb on - strand, within HSERO_RS03085 at 676.382 kb on - strand, within HSERO_RS03085 at 676.495 kb on - strand, within HSERO_RS03085 at 676.561 kb on - strand at 676.561 kb on - strand at 676.561 kb on - strand at 676.654 kb on + strand at 676.679 kb on + strand at 676.818 kb on + strand, within HSERO_RS03090 at 676.929 kb on + strand, within HSERO_RS03090 at 676.929 kb on + strand, within HSERO_RS03090 at 677.120 kb on + strand, within HSERO_RS03090 at 677.171 kb on + strand, within HSERO_RS03090 at 677.179 kb on - strand, within HSERO_RS03090 at 677.241 kb on + strand at 677.264 kb on - strand at 677.266 kb on - strand at 677.330 kb on + strand at 677.338 kb on - strand at 677.396 kb on + strand at 677.396 kb on + strand at 677.396 kb on + strand at 677.404 kb on - strand at 677.455 kb on + strand at 677.516 kb on + strand at 677.539 kb on + strand at 677.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 675,582 - -1.0 675,892 + HSERO_RS03085 0.13 +0.0 676,100 + HSERO_RS03085 0.38 +1.7 676,132 - HSERO_RS03085 0.42 +0.6 676,382 - HSERO_RS03085 0.72 +0.4 676,495 - HSERO_RS03085 0.86 +0.7 676,561 - +2.0 676,561 - -0.5 676,561 - +0.3 676,654 + +0.5 676,679 + +0.5 676,818 + HSERO_RS03090 0.31 +0.0 676,929 + HSERO_RS03090 0.48 +0.2 676,929 + HSERO_RS03090 0.48 +0.3 677,120 + HSERO_RS03090 0.78 -0.6 677,171 + HSERO_RS03090 0.86 +2.3 677,179 - HSERO_RS03090 0.87 -1.3 677,241 + +0.1 677,264 - -0.8 677,266 - -0.1 677,330 + +1.4 677,338 - +0.6 677,396 + -0.4 677,396 + -2.5 677,396 + -0.7 677,404 - +0.9 677,455 + +0.6 677,516 + +0.8 677,539 + -0.8 677,605 - -0.1
Or see this region's nucleotide sequence