Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02870 and HSERO_RS02875 are separated by 128 nucleotides HSERO_RS02875 and HSERO_RS02880 are separated by 56 nucleotides HSERO_RS02880 and HSERO_RS02885 are separated by 131 nucleotides
HSERO_RS02870: HSERO_RS02870 - Zn-dependent hydrolase, at 630,986 to 631,981
_RS02870
HSERO_RS02875: HSERO_RS02875 - transcriptional regulator, at 632,110 to 632,484
_RS02875
HSERO_RS02880: HSERO_RS02880 - SAM-dependent methyltransferase, at 632,541 to 633,146
_RS02880
HSERO_RS02885: HSERO_RS02885 - esterase, at 633,278 to 634,102
_RS02885
Position (kb) 632
633 Strain fitness (log2 ratio) -2
-1
0
1 at 631.347 kb on + strand, within HSERO_RS02870 at 631.419 kb on + strand, within HSERO_RS02870 at 631.427 kb on - strand, within HSERO_RS02870 at 631.525 kb on - strand, within HSERO_RS02870 at 631.586 kb on - strand, within HSERO_RS02870 at 631.587 kb on - strand, within HSERO_RS02870 at 631.744 kb on - strand, within HSERO_RS02870 at 631.998 kb on - strand at 632.076 kb on - strand at 632.076 kb on - strand at 632.406 kb on + strand, within HSERO_RS02875 at 632.658 kb on + strand, within HSERO_RS02880 at 632.658 kb on + strand, within HSERO_RS02880 at 632.673 kb on + strand, within HSERO_RS02880 at 632.743 kb on + strand, within HSERO_RS02880 at 632.834 kb on + strand, within HSERO_RS02880 at 632.868 kb on - strand, within HSERO_RS02880 at 632.876 kb on + strand, within HSERO_RS02880 at 632.945 kb on + strand, within HSERO_RS02880 at 633.149 kb on - strand at 633.225 kb on - strand at 633.225 kb on - strand at 633.276 kb on - strand at 633.280 kb on - strand at 633.319 kb on + strand at 633.397 kb on + strand, within HSERO_RS02885
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 631,347 + HSERO_RS02870 0.36 +0.2 631,419 + HSERO_RS02870 0.43 +1.0 631,427 - HSERO_RS02870 0.44 -1.2 631,525 - HSERO_RS02870 0.54 -0.1 631,586 - HSERO_RS02870 0.60 +0.0 631,587 - HSERO_RS02870 0.60 +0.4 631,744 - HSERO_RS02870 0.76 +0.1 631,998 - -1.0 632,076 - -0.3 632,076 - +0.1 632,406 + HSERO_RS02875 0.79 +0.7 632,658 + HSERO_RS02880 0.19 -0.7 632,658 + HSERO_RS02880 0.19 -0.4 632,673 + HSERO_RS02880 0.22 -0.2 632,743 + HSERO_RS02880 0.33 +0.3 632,834 + HSERO_RS02880 0.48 -0.1 632,868 - HSERO_RS02880 0.54 +1.4 632,876 + HSERO_RS02880 0.55 -0.2 632,945 + HSERO_RS02880 0.67 +0.2 633,149 - -2.0 633,225 - +0.3 633,225 - +0.6 633,276 - -0.1 633,280 - +0.9 633,319 + +0.2 633,397 + HSERO_RS02885 0.14 +0.1
Or see this region's nucleotide sequence