Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02215

Experiment: D-Salicin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Salicin (C)
2,361,459	-		CCNA_02213	0.64	-1.9
2,361,477	-		CCNA_02213	0.66	-0.6
2,361,477	-		CCNA_02213	0.66	+0.9
2,361,477	-		CCNA_02213	0.66	-0.9
2,361,477	-		CCNA_02213	0.66	-0.3
2,361,477	-		CCNA_02213	0.66	-0.7
2,361,479	+		CCNA_02213	0.66	+0.5
2,361,496	+		CCNA_02213	0.68	-1.5
2,361,496	+		CCNA_02213	0.68	+0.1
2,361,504	-		CCNA_02213	0.68	+0.2
2,361,511	+		CCNA_02213	0.69	-0.4
2,361,511	+		CCNA_02213	0.69	-1.0
2,361,511	+		CCNA_02213	0.69	-2.1
2,361,511	+		CCNA_02213	0.69	-1.1
2,361,511	+		CCNA_02213	0.69	-0.4
2,361,519	-		CCNA_02213	0.70	-1.6
2,361,519	-		CCNA_02213	0.70	+0.2
2,361,519	-		CCNA_02213	0.70	+0.9
2,361,519	-		CCNA_02213	0.70	+0.5
2,361,519	-		CCNA_02213	0.70	-0.4
2,361,535	+		CCNA_02213	0.71	-1.5
2,361,543	-		CCNA_02213	0.72	-1.3
2,361,725	-		CCNA_02213	0.89	-1.0
2,361,831	-				-1.0
2,361,831	-				+0.3
2,361,831	-				+0.3
2,361,831	-				-0.2
2,361,846	+				-0.2
2,361,862	-				+1.4
2,361,950	+				-1.3
2,361,958	-				-1.0
2,361,996	-				+0.5
2,361,996	-				-0.9
2,362,113	-		CCNA_02214	0.27	+0.5
2,362,113	-		CCNA_02214	0.27	-1.0
2,362,113	-		CCNA_02214	0.27	-0.9
2,362,120	+		CCNA_02214	0.29	-2.4
2,362,120	+		CCNA_02214	0.29	+0.5
2,362,122	+		CCNA_02214	0.29	-0.4
2,362,128	-		CCNA_02214	0.30	+0.4
2,362,128	-				+0.8
2,362,128	-		CCNA_02214	0.30	+0.9
2,362,139	+		CCNA_02214	0.33	+0.1
2,362,140	-		CCNA_02214	0.33	-0.4
2,362,148	+		CCNA_02214	0.35	-1.7
2,362,156	-		CCNA_02214	0.37	+1.0
2,362,163	-		CCNA_02214	0.38	-1.0
2,362,168	-		CCNA_02214	0.39	-2.4
2,362,179	-		CCNA_02214	0.42	-0.4
2,362,201	+		CCNA_02214	0.47	+2.1
2,362,209	-		CCNA_02214	0.49	-2.9
2,362,253	-		CCNA_02214	0.59	-1.4
2,362,253	-		CCNA_02214	0.59	+0.1
2,362,253	-		CCNA_02214	0.59	-2.2
2,362,282	+		CCNA_02214	0.65	-3.1
2,362,290	-		CCNA_02214	0.67	-0.2
2,362,290	-		CCNA_02214	0.67	-1.2
2,362,290	-		CCNA_02214	0.67	-1.1
2,362,392	-				-2.4
2,362,397	+				-0.1
2,362,405	-				-0.2
2,362,405	-				-1.9
2,362,407	+				-0.6
2,362,407	+				-0.4
2,362,407	+				-0.1
2,362,407	+				-0.3
2,362,407	+				+0.6
2,362,407	+				-0.8
2,362,407	+				-0.4
2,362,407	+				-1.1
2,362,407	+				+0.4
2,362,407	+				-1.3
2,362,415	-				-0.1
2,362,415	-				-3.1
2,362,415	-				+0.4
2,362,415	-				-1.4
2,362,415	-				-0.7
2,362,415	-				-2.2
2,362,415	-				+0.8
2,362,428	+				-1.3
2,362,428	+				-1.2
2,362,428	+				+0.1
2,362,436	-				-0.2
2,362,462	+				+0.6
2,362,479	+				-2.0
2,362,511	+				-0.6
2,362,560	-				+0.3
2,362,560	-				+1.3
2,362,562	+				+1.4
2,362,570	-				-0.0
2,362,570	-				+1.0
2,362,615	+		CCNA_02215	0.14	+0.2
2,362,664	+		CCNA_02215	0.18	-3.1
2,362,677	-		CCNA_02215	0.19	+0.8
2,362,677	-		CCNA_02215	0.19	+0.6
2,362,677	-		CCNA_02215	0.19	+0.6
2,362,729	+		CCNA_02215	0.23	-1.0
2,362,815	+		CCNA_02215	0.30	-0.3
2,362,852	-		CCNA_02215	0.33	+1.0
2,362,854	+		CCNA_02215	0.33	+0.7
2,362,860	+		CCNA_02215	0.34	-1.4
2,362,910	-		CCNA_02215	0.38	+1.1
2,362,910	-		CCNA_02215	0.38	+0.5
2,362,947	+		CCNA_02215	0.41	-0.8
2,363,003	+		CCNA_02215	0.46	-1.4
2,363,039	+		CCNA_02215	0.49	-1.2
2,363,063	-		CCNA_02215	0.50	+1.0
2,363,081	-		CCNA_02215	0.52	-2.5
2,363,168	+		CCNA_02215	0.59	-1.8
2,363,168	+		CCNA_02215	0.59	+1.8
2,363,173	+		CCNA_02215	0.60	-1.9
2,363,176	-		CCNA_02215	0.60	+1.4
2,363,176	-		CCNA_02215	0.60	+0.7
2,363,186	-		CCNA_02215	0.61	+0.6
2,363,224	+		CCNA_02215	0.64	-2.2
2,363,234	-		CCNA_02215	0.65	+0.3
2,363,243	+		CCNA_02215	0.65	-1.0
2,363,243	+		CCNA_02215	0.65	-1.2
2,363,251	-		CCNA_02215	0.66	+0.6
2,363,271	+		CCNA_02215	0.68	+0.7
2,363,335	+				+2.4
2,363,343	-		CCNA_02215	0.74	+0.3
2,363,380	-		CCNA_02215	0.77	-0.6
2,363,380	-		CCNA_02215	0.77	-0.1
2,363,386	+		CCNA_02215	0.77	-0.7
2,363,483	-		CCNA_02215	0.85	+0.3
2,363,483	-		CCNA_02215	0.85	+1.3
2,363,488	-		CCNA_02215	0.86	+1.6
2,363,490	+		CCNA_02215	0.86	-0.1
2,363,503	-		CCNA_02215	0.87	+0.5
2,363,530	+		CCNA_02215	0.89	-1.9
2,363,537	-		CCNA_02215	0.90	+2.3
2,363,538	-		CCNA_02215	0.90	+2.2
2,363,543	-				+0.5
2,363,561	-				+2.2
2,363,589	-				+0.0
2,363,625	-				+0.1
2,363,631	-				+0.2
2,363,635	+				+1.4
2,363,636	+				-2.9
2,363,669	+				-0.1
2,363,669	+				-0.1
2,363,669	+				+1.2
2,363,671	+				-2.6
2,363,677	-				-2.3
2,363,677	-				+0.8
2,363,679	+				-1.7
2,363,759	+		CCNA_02216	0.31	-0.1
2,363,767	-		CCNA_02216	0.34	+1.2
2,363,787	+		CCNA_02216	0.41	-0.2
2,363,795	+		CCNA_02216	0.43	+0.4
2,363,831	-		CCNA_02216	0.56	-1.0
2,363,850	+		CCNA_02216	0.62	+0.7
2,363,858	-		CCNA_02216	0.65	-2.5
2,363,876	-		CCNA_02216	0.71	-0.8
2,363,916	+		CCNA_02216	0.85	-1.5
2,363,940	-				+2.4
2,364,000	-				+0.6
2,364,066	-				+1.4
2,364,076	-				+1.5
2,364,077	+				-2.1
2,364,079	+				+0.7
2,364,087	-				+0.8
2,364,087	-				+1.2
2,364,087	-				+1.1
2,364,087	-				+2.0
2,364,099	+				-1.3
2,364,141	+		CCNA_02217	0.20	-1.1
2,364,149	-		CCNA_02217	0.22	+0.8
2,364,276	+		CCNA_02217	0.64	-2.3
2,364,334	+		CCNA_02217	0.83	-2.6
2,364,479	+				+0.4
2,364,487	-				-0.6
2,364,535	+				-1.0
2,364,555	+		CCNA_02218	0.10	-1.7
2,364,563	-		CCNA_02218	0.12	+0.1
2,364,563	-		CCNA_02218	0.12	-1.6
2,364,563	-		CCNA_02218	0.12	-1.4
2,364,611	+		CCNA_02218	0.19	-1.1
2,364,629	-		CCNA_02218	0.21	-0.3
2,364,629	-		CCNA_02218	0.21	-1.2
2,364,634	-		CCNA_02218	0.22	-2.4
2,364,634	-		CCNA_02218	0.22	-1.4
2,364,657	-		CCNA_02218	0.25	-0.3
2,364,659	+		CCNA_02218	0.25	-1.0