Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19430

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
4,819,803	-		CA265_RS19425	0.30	+0.1
4,819,877	-		CA265_RS19425	0.36	+0.2
4,819,885	+		CA265_RS19425	0.36	+0.5
4,819,930	-		CA265_RS19425	0.40	+0.1
4,819,956	-		CA265_RS19425	0.42	-0.4
4,819,956	-		CA265_RS19425	0.42	-0.5
4,819,962	-		CA265_RS19425	0.42	-0.3
4,820,047	-		CA265_RS19425	0.49	+0.3
4,820,093	-		CA265_RS19425	0.52	-0.2
4,820,105	+		CA265_RS19425	0.53	+0.2
4,820,106	-		CA265_RS19425	0.53	+0.7
4,820,137	+		CA265_RS19425	0.56	+0.2
4,820,138	-		CA265_RS19425	0.56	-0.7
4,820,259	-		CA265_RS19425	0.65	-0.5
4,820,278	-		CA265_RS19425	0.67	+0.1
4,820,354	+		CA265_RS19425	0.73	-1.0
4,820,457	+		CA265_RS19425	0.81	-0.6
4,820,516	-		CA265_RS19425	0.85	-1.9
4,820,592	+				+0.7
4,820,628	+				-0.1
4,820,650	+				+0.8
4,820,677	-				+1.0
4,820,720	+				-0.7
4,820,729	+				-0.7
4,820,729	+				-0.6
4,820,755	+				+0.2
4,820,774	-				+0.8
4,820,866	+				-0.8
4,820,867	-				-1.4
4,820,902	+				-2.8
4,820,903	-				-1.0
4,820,903	-				-0.2
4,820,935	+				-2.2
4,820,936	-				+0.5
4,820,936	-				-3.4
4,820,937	+				-2.5
4,820,937	+				-2.3
4,820,938	-				-0.7
4,821,002	-		CA265_RS19430	0.11	-1.3
4,821,103	-		CA265_RS19430	0.16	-2.5
4,821,116	-		CA265_RS19430	0.16	-2.8
4,821,164	-		CA265_RS19430	0.19	-0.4
4,821,177	+		CA265_RS19430	0.19	-3.0
4,821,177	+		CA265_RS19430	0.19	-1.4
4,821,178	-		CA265_RS19430	0.19	-2.4
4,821,181	+		CA265_RS19430	0.19	-2.2
4,821,181	+		CA265_RS19430	0.19	-3.1
4,821,185	+		CA265_RS19430	0.20	-1.4
4,821,186	-		CA265_RS19430	0.20	-0.2
4,821,186	-		CA265_RS19430	0.20	-2.9
4,821,305	+				+0.8
4,821,305	+		CA265_RS19430	0.25	-0.5
4,821,326	-		CA265_RS19430	0.26	-3.2
4,821,335	+		CA265_RS19430	0.27	-1.9
4,821,360	-		CA265_RS19430	0.28	-1.9
4,821,412	-		CA265_RS19430	0.31	-1.7
4,821,412	-		CA265_RS19430	0.31	-2.7
4,821,412	-		CA265_RS19430	0.31	-3.2
4,821,424	+		CA265_RS19430	0.31	-1.7
4,821,428	+		CA265_RS19430	0.31	-2.6
4,821,442	-		CA265_RS19430	0.32	-4.3
4,821,491	-		CA265_RS19430	0.35	-2.1
4,821,511	+		CA265_RS19430	0.35	-1.5
4,821,512	-		CA265_RS19430	0.36	-2.3
4,821,518	+		CA265_RS19430	0.36	-2.5
4,821,550	+		CA265_RS19430	0.37	-2.4
4,821,578	+		CA265_RS19430	0.39	-2.8
4,821,579	-		CA265_RS19430	0.39	-2.1
4,821,609	-		CA265_RS19430	0.40	-2.7
4,821,660	-		CA265_RS19430	0.43	-1.5
4,821,660	-		CA265_RS19430	0.43	-1.4
4,821,663	+		CA265_RS19430	0.43	-3.6
4,821,783	+		CA265_RS19430	0.49	-0.3
4,821,909	+		CA265_RS19430	0.55	-1.9
4,821,967	+		CA265_RS19430	0.58	-2.0
4,822,046	+		CA265_RS19430	0.62	-1.7
4,822,104	+		CA265_RS19430	0.65	-2.4
4,822,109	-		CA265_RS19430	0.65	-3.8
4,822,114	+		CA265_RS19430	0.65	-2.1
4,822,215	+		CA265_RS19430	0.70	-2.9
4,822,293	-		CA265_RS19430	0.74	-1.7
4,822,309	+		CA265_RS19430	0.75	-2.3
4,822,456	+		CA265_RS19430	0.82	-1.8
4,822,456	+		CA265_RS19430	0.82	-3.1
4,822,456	+		CA265_RS19430	0.82	-3.3
4,822,513	-		CA265_RS19430	0.85	-2.1
4,822,513	-		CA265_RS19430	0.85	-1.5
4,822,516	+		CA265_RS19430	0.85	-3.1
4,822,516	+		CA265_RS19430	0.85	-1.9
4,822,551	+		CA265_RS19430	0.86	-0.9
4,822,558	-		CA265_RS19430	0.87	-0.8
4,822,572	+		CA265_RS19430	0.87	-1.2
4,822,639	+				-3.3
4,822,761	-				+0.8
4,822,761	-				-2.9
4,822,761	-				-2.6
4,822,803	+				-1.8
4,822,803	+				-1.9
4,822,898	+				-0.8
4,822,973	-				-0.3
4,823,036	-				+1.0
4,823,043	+				-0.1
4,823,043	+				+0.4
4,823,051	+				-0.7
4,823,082	+				-0.6
4,823,083	-				+2.4
4,823,095	-				-0.1
4,823,100	+				+0.3
4,823,100	+				-0.4
4,823,101	-				+0.2
4,823,101	-				-0.0
4,823,233	+				-0.3
4,823,233	+				+0.3
4,823,233	+				+0.3
4,823,234	-				+0.5
4,823,281	+				+0.9
4,823,281	+				-0.1
4,823,282	-				-0.1
4,823,331	+				+0.5
4,823,332	-				-0.4
4,823,354	+				-0.9
4,823,354	+				-0.9
4,823,357	-				+0.2
4,823,359	-				-0.9
4,823,454	+				+0.4
4,823,454	+				-0.0
4,823,481	-				-0.1
4,823,498	+				-0.0
4,823,498	+				+0.6
4,823,498	+				+0.2
4,823,499	-				-0.0
4,823,551	+				+2.4
4,823,555	+		CA265_RS19435	0.12	-0.3
4,823,577	+		CA265_RS19435	0.13	-0.1
4,823,581	-		CA265_RS19435	0.13	-0.8
4,823,621	+		CA265_RS19435	0.14	-0.1
4,823,692	-		CA265_RS19435	0.17	-1.4
4,823,692	-		CA265_RS19435	0.17	+1.2
4,823,699	+		CA265_RS19435	0.18	-0.7
4,823,725	+		CA265_RS19435	0.19	-0.4
4,823,726	-		CA265_RS19435	0.19	-0.1
4,823,735	-		CA265_RS19435	0.19	+0.6
4,823,759	+		CA265_RS19435	0.20	-0.1
4,823,767	+		CA265_RS19435	0.21	+0.2
4,823,811	-		CA265_RS19435	0.22	-0.0