Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17470

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
4,355,459	+				+0.7
4,355,459	+				+0.4
4,355,479	-		CA265_RS17465	0.10	-0.3
4,355,502	+		CA265_RS17465	0.13	-0.6
4,355,535	+		CA265_RS17465	0.17	+1.7
4,355,535	+		CA265_RS17465	0.17	+0.5
4,355,536	-		CA265_RS17465	0.18	-0.6
4,355,565	+		CA265_RS17465	0.21	-0.2
4,355,625	-		CA265_RS17465	0.29	+0.9
4,355,631	+		CA265_RS17465	0.30	+1.1
4,355,658	-		CA265_RS17465	0.33	+0.3
4,355,658	-		CA265_RS17465	0.33	+0.2
4,355,669	+		CA265_RS17465	0.34	+0.8
4,355,731	+		CA265_RS17465	0.42	+0.1
4,355,787	-		CA265_RS17465	0.49	+0.3
4,355,831	+		CA265_RS17465	0.55	-0.2
4,355,832	-		CA265_RS17465	0.55	-0.9
4,355,835	+		CA265_RS17465	0.55	+0.5
4,355,843	+		CA265_RS17465	0.56	-0.6
4,355,855	+		CA265_RS17465	0.58	+0.3
4,356,018	-		CA265_RS17465	0.78	+0.1
4,356,024	+		CA265_RS17465	0.79	-1.3
4,356,024	+		CA265_RS17465	0.79	-1.6
4,356,024	+		CA265_RS17465	0.79	+0.8
4,356,025	-		CA265_RS17465	0.79	+0.6
4,356,025	-		CA265_RS17465	0.79	-0.5
4,356,106	-		CA265_RS17465	0.90	+0.2
4,356,202	-				-0.4
4,356,223	+				-0.7
4,356,224	-				+0.0
4,356,227	+				+0.1
4,356,298	+				-0.2
4,356,299	-				-0.4
4,356,299	-				-0.2
4,356,350	+				-0.2
4,356,465	+		CA265_RS17470	0.12	+0.3
4,356,536	+		CA265_RS17470	0.19	+0.1
4,356,536	+		CA265_RS17470	0.19	+0.0
4,356,599	-		CA265_RS17470	0.25	-1.7
4,356,599	-		CA265_RS17470	0.25	+0.3
4,356,619	-		CA265_RS17470	0.27	+0.6
4,356,684	+		CA265_RS17470	0.33	+0.1
4,356,695	-		CA265_RS17470	0.34	+0.4
4,356,698	-		CA265_RS17470	0.35	+0.5
4,356,698	-		CA265_RS17470	0.35	+0.9
4,356,707	-		CA265_RS17470	0.36	+0.8
4,356,748	-		CA265_RS17470	0.40	-0.1
4,356,767	-		CA265_RS17470	0.42	+0.3
4,356,767	-		CA265_RS17470	0.42	-0.6
4,356,770	+		CA265_RS17470	0.42	+0.4
4,356,795	+		CA265_RS17470	0.44	+0.7
4,356,824	+		CA265_RS17470	0.47	+1.1
4,356,825	-		CA265_RS17470	0.47	+0.4
4,356,826	+		CA265_RS17470	0.47	-0.2
4,356,826	+		CA265_RS17470	0.47	-0.0
4,356,827	-		CA265_RS17470	0.48	-0.3
4,356,827	-		CA265_RS17470	0.48	-0.2
4,356,842	-		CA265_RS17470	0.49	-0.1
4,356,999	+		CA265_RS17470	0.65	-0.4
4,357,000	-		CA265_RS17470	0.65	-1.0
4,357,065	+		CA265_RS17470	0.71	+0.7
4,357,065	+		CA265_RS17470	0.71	+0.3
4,357,066	-		CA265_RS17470	0.71	-0.1
4,357,120	-		CA265_RS17470	0.77	-0.0
4,357,171	+		CA265_RS17470	0.82	+0.2
4,357,185	+		CA265_RS17470	0.83	+0.9
4,357,249	+		CA265_RS17470	0.90	+0.3
4,357,256	+				+0.8
4,357,356	+				-0.3
4,357,412	+				-0.0
4,357,413	-				-0.1
4,357,413	-				+0.6
4,357,556	+		CA265_RS17475	0.30	-0.0
4,357,567	+		CA265_RS17475	0.32	-0.2
4,357,567	+		CA265_RS17475	0.32	-1.6
4,357,567	+		CA265_RS17475	0.32	-1.1
4,357,567	+		CA265_RS17475	0.32	-0.2
4,357,568	-		CA265_RS17475	0.32	-0.7
4,357,570	+		CA265_RS17475	0.32	-0.7
4,357,572	+		CA265_RS17475	0.33	+0.9
4,357,667	-		CA265_RS17475	0.47	-0.2
4,357,725	-		CA265_RS17475	0.56	+0.3
4,357,740	-		CA265_RS17475	0.58	-0.7
4,357,792	-		CA265_RS17475	0.66	-1.1
4,358,024	-				-0.1
4,358,218	+				-0.6
4,358,234	+		CA265_RS17480	0.17	+0.1
4,358,244	+		CA265_RS17480	0.22	+0.4
4,358,247	-		CA265_RS17480	0.23	-0.3
4,358,277	-		CA265_RS17480	0.38	-0.3
4,358,277	-		CA265_RS17480	0.38	-0.3
4,358,302	+		CA265_RS17480	0.50	-0.3
4,358,312	+		CA265_RS17480	0.54	+0.3
4,358,313	-		CA265_RS17480	0.55	-1.5
4,358,319	+		CA265_RS17480	0.58	-0.3
4,358,335	+		CA265_RS17480	0.65	+0.1