Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09085

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
2,262,290	+		CA265_RS09075	0.21	+1.1
2,262,290	+		CA265_RS09075	0.21	+0.3
2,262,337	+		CA265_RS09075	0.28	+0.1
2,262,338	-		CA265_RS09075	0.28	+0.2
2,262,390	+		CA265_RS09075	0.37	+0.1
2,262,404	+		CA265_RS09075	0.39	-0.7
2,262,405	-		CA265_RS09075	0.39	+1.1
2,262,405	-		CA265_RS09075	0.39	+0.3
2,262,431	-		CA265_RS09075	0.44	-1.7
2,262,476	+		CA265_RS09075	0.51	+0.4
2,262,501	-		CA265_RS09075	0.55	+0.2
2,262,592	-		CA265_RS09075	0.70	+1.4
2,262,602	+		CA265_RS09075	0.71	-0.1
2,262,784	-				+0.4
2,262,840	+				+0.4
2,262,958	+				+0.5
2,262,958	+				-0.1
2,262,958	+				+0.3
2,262,959	-				+0.2
2,262,982	-				+0.3
2,262,986	-				-0.4
2,263,081	-		CA265_RS09080	0.40	+0.8
2,263,144	+		CA265_RS09080	0.61	+0.0
2,263,145	-		CA265_RS09080	0.62	-0.1
2,263,159	-		CA265_RS09080	0.66	-0.7
2,263,293	+				-1.9
2,263,293	+				-2.1
2,263,323	-		CA265_RS09085	0.11	-0.9
2,263,337	-		CA265_RS09085	0.13	-1.8
2,263,376	+		CA265_RS09085	0.19	-1.7
2,263,423	+		CA265_RS09085	0.26	-3.3
2,263,455	-		CA265_RS09085	0.31	-3.0
2,263,585	+		CA265_RS09085	0.52	-3.6
2,263,586	-		CA265_RS09085	0.52	-4.0
2,263,651	+		CA265_RS09085	0.62	-2.1
2,263,651	+		CA265_RS09085	0.62	-1.8
2,263,652	-		CA265_RS09085	0.62	-3.6
2,263,669	-		CA265_RS09085	0.65	-3.3
2,263,701	-		CA265_RS09085	0.70	-1.9
2,263,795	+				+0.1
2,263,795	+		CA265_RS09085	0.85	-2.0
2,263,796	-		CA265_RS09085	0.85	-2.6
2,263,796	-		CA265_RS09085	0.85	-1.3
2,263,796	-		CA265_RS09085	0.85	-2.0
2,263,811	-		CA265_RS09085	0.87	-2.8
2,263,896	-				-0.9
2,263,896	-				-0.3
2,263,897	+				-1.4
2,263,906	-				+0.1
2,263,994	-				-2.3
2,264,009	-				-1.5
2,264,012	+				-1.4
2,264,012	+				-1.6
2,264,031	-				-1.8
2,264,060	+				-1.6
2,264,140	-				-3.0
2,264,167	+				-1.5
2,264,173	-				-1.5
2,264,278	+		CA265_RS09090	0.14	-2.8
2,264,327	-		CA265_RS09090	0.16	-2.1
2,264,365	-		CA265_RS09090	0.18	-2.0
2,264,435	-		CA265_RS09090	0.20	-3.1
2,264,436	+		CA265_RS09090	0.21	-1.2
2,264,546	-		CA265_RS09090	0.25	+0.1
2,264,546	-		CA265_RS09090	0.25	-2.0
2,264,634	-		CA265_RS09090	0.28	-3.0
2,264,783	-		CA265_RS09090	0.35	-1.0
2,264,859	+		CA265_RS09090	0.38	-1.6
2,264,880	+		CA265_RS09090	0.38	-2.3