Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07560

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
1,899,218	+				-0.1
1,899,218	+				+0.1
1,899,248	+				-0.2
1,899,268	+				+0.5
1,899,285	+				+1.0
1,899,302	-				+0.3
1,899,302	-				-0.3
1,899,312	-				+1.2
1,899,317	+				-0.0
1,899,321	+				-0.4
1,899,326	-				-1.5
1,899,355	-				-0.2
1,899,406	+				+0.2
1,899,439	+		CA265_RS07550	0.12	-0.4
1,899,491	+		CA265_RS07550	0.28	+0.2
1,899,491	+		CA265_RS07550	0.28	+0.6
1,899,492	-		CA265_RS07550	0.28	-0.0
1,899,542	+		CA265_RS07550	0.43	+0.0
1,899,623	+		CA265_RS07550	0.67	+0.2
1,899,701	+				+0.1
1,899,701	+				+1.1
1,899,714	-				+0.1
1,899,714	-				-0.5
1,899,716	-				-0.4
1,899,766	-				-0.0
1,899,805	+		CA265_RS07555	0.14	+0.8
1,899,856	-		CA265_RS07555	0.25	-0.3
1,899,877	+		CA265_RS07555	0.29	-0.7
1,899,877	+		CA265_RS07555	0.29	-1.2
1,899,932	+		CA265_RS07555	0.41	+0.1
1,899,933	-		CA265_RS07555	0.42	+0.8
1,899,933	-		CA265_RS07555	0.42	+0.2
1,899,946	-		CA265_RS07555	0.44	-0.5
1,899,949	-		CA265_RS07555	0.45	+0.0
1,899,949	-		CA265_RS07555	0.45	-0.5
1,899,960	-		CA265_RS07555	0.47	-0.1
1,899,960	-		CA265_RS07555	0.47	-0.0
1,899,962	-		CA265_RS07555	0.48	-0.5
1,899,962	-		CA265_RS07555	0.48	-0.1
1,899,962	-		CA265_RS07555	0.48	-0.3
1,900,044	-		CA265_RS07555	0.66	-1.0
1,900,044	-		CA265_RS07555	0.66	-0.2
1,900,084	-		CA265_RS07555	0.75	-0.1
1,900,154	+		CA265_RS07555	0.90	-0.1
1,900,155	-				-0.0
1,900,223	-				-0.7
1,900,274	-				+0.0
1,900,299	-				-0.6
1,900,349	-				-0.5
1,900,353	+		CA265_RS07560	0.10	+0.4
1,900,475	+		CA265_RS07560	0.19	-0.0
1,900,488	+		CA265_RS07560	0.20	-2.3
1,900,549	-		CA265_RS07560	0.24	-0.4
1,900,600	-		CA265_RS07560	0.28	-0.3
1,900,645	+		CA265_RS07560	0.31	+0.3
1,900,646	-		CA265_RS07560	0.31	+1.4
1,900,646	-		CA265_RS07560	0.31	-0.2
1,900,684	+		CA265_RS07560	0.34	+0.4
1,900,700	+		CA265_RS07560	0.35	-0.8
1,900,705	-		CA265_RS07560	0.36	+0.5
1,900,705	-		CA265_RS07560	0.36	-0.8
1,900,731	-		CA265_RS07560	0.38	-1.9
1,900,737	+		CA265_RS07560	0.38	-0.2
1,900,749	+		CA265_RS07560	0.39	+0.7
1,900,790	-		CA265_RS07560	0.42	-0.2
1,900,843	-		CA265_RS07560	0.46	-0.3
1,900,847	+		CA265_RS07560	0.46	-0.0
1,900,847	+		CA265_RS07560	0.46	+0.5
1,900,894	+		CA265_RS07560	0.49	-0.4
1,900,894	+		CA265_RS07560	0.49	-0.6
1,900,895	-		CA265_RS07560	0.50	-1.6
1,900,897	+		CA265_RS07560	0.50	-0.5
1,900,966	+		CA265_RS07560	0.55	-1.5
1,900,985	+		CA265_RS07560	0.56	+0.1
1,900,985	+		CA265_RS07560	0.56	+0.0
1,901,084	-		CA265_RS07560	0.63	-0.2
1,901,108	+		CA265_RS07560	0.65	+0.5
1,901,129	-		CA265_RS07560	0.67	+0.1
1,901,129	-		CA265_RS07560	0.67	-0.7
1,901,204	-		CA265_RS07560	0.72	+0.6
1,901,267	+		CA265_RS07560	0.77	+1.1
1,901,267	+		CA265_RS07560	0.77	-0.2
1,901,321	-		CA265_RS07560	0.81	-1.0
1,901,425	+		CA265_RS07560	0.88	-0.2
1,901,447	+		CA265_RS07560	0.90	+0.6
1,901,449	+		CA265_RS07560	0.90	-0.5
1,901,450	-				+1.1
1,901,474	-				-0.1
1,901,478	+				+1.0
1,901,478	+				-0.2
1,901,479	-				-1.5
1,901,479	-				-1.2
1,901,567	-				-0.5
1,901,672	+				+0.2
1,901,719	+				-0.3
1,901,720	-				-0.6
1,901,753	-				-1.0
1,901,812	-		CA265_RS07565	0.16	-0.6
1,901,818	-		CA265_RS07565	0.17	+1.7
1,901,818	-		CA265_RS07565	0.17	-0.2
1,901,852	-		CA265_RS07565	0.22	-0.1
1,901,856	+		CA265_RS07565	0.23	+0.8
1,901,893	+		CA265_RS07565	0.28	+0.4
1,901,902	+		CA265_RS07565	0.30	-2.5
1,901,932	+		CA265_RS07565	0.35	+0.7
1,901,989	-		CA265_RS07565	0.44	-0.5
1,902,024	-		CA265_RS07565	0.49	+0.1
1,902,094	+		CA265_RS07565	0.60	+0.0
1,902,177	-		CA265_RS07565	0.73	+0.2
1,902,304	+				-0.2
1,902,305	-				-1.5
1,902,305	-				-0.2
1,902,305	-				-0.0
1,902,308	+				+0.2
1,902,309	-				+0.1
1,902,396	+		CA265_RS07570	0.12	-0.6
1,902,434	-		CA265_RS07570	0.22	-0.4
1,902,449	+		CA265_RS07570	0.26	+0.3
1,902,450	-		CA265_RS07570	0.26	+0.0
1,902,511	-		CA265_RS07570	0.43	-0.1
1,902,517	-		CA265_RS07570	0.45	+0.4
1,902,557	+		CA265_RS07570	0.56	+0.3
1,902,565	-		CA265_RS07570	0.58	+0.3
1,902,570	-		CA265_RS07570	0.60	+0.4