Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05960

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
1,465,770	-				-0.7
1,466,060	+				+2.0
1,466,130	-				-0.5
1,466,146	-				+0.8
1,466,146	-				-0.3
1,466,255	+				-0.2
1,466,324	+				+0.0
1,466,381	+				+0.1
1,466,413	-				-1.1
1,466,413	-				+0.9
1,466,417	-				+0.6
1,466,553	+				+0.3
1,466,771	+				-0.1
1,466,771	+				-0.6
1,466,772	-				-0.4
1,466,797	-				-0.0
1,466,829	+				+0.6
1,466,921	+		CA265_RS05960	0.20	-0.1
1,467,030	-		CA265_RS05960	0.34	-0.4
1,467,139	-		CA265_RS05960	0.48	+0.8
1,467,140	+		CA265_RS05960	0.48	+0.4
1,467,141	-				+1.6
1,467,141	-		CA265_RS05960	0.48	+1.2
1,467,178	-		CA265_RS05960	0.53	+0.5
1,467,200	+		CA265_RS05960	0.55	+0.5
1,467,211	-		CA265_RS05960	0.57	+0.8
1,467,305	-		CA265_RS05960	0.69	+0.0
1,467,328	+		CA265_RS05960	0.72	+0.4
1,467,329	-		CA265_RS05960	0.72	+0.1
1,467,356	+		CA265_RS05960	0.75	-0.2
1,467,446	+		CA265_RS05960	0.87	+0.1
1,467,447	-		CA265_RS05960	0.87	-0.4
1,467,589	-				-0.2
1,467,593	+				-0.1
1,467,600	+				-0.1
1,467,600	+				+0.2
1,467,607	+				+0.4
1,467,643	+				-0.0
1,467,644	-				-0.4
1,467,644	-				-0.2
1,467,727	+				-0.2
1,467,728	-				-1.1
1,467,798	+				-0.3
1,467,835	-				-0.7
1,467,835	-				+0.3
1,467,835	-				-0.1
1,467,835	-				+0.5
1,467,907	-				-0.3
1,468,013	+		CA265_RS05965	0.13	-2.1
1,468,017	+		CA265_RS05965	0.13	+0.0
1,468,047	+		CA265_RS05965	0.14	-0.1
1,468,048	-		CA265_RS05965	0.14	+0.1
1,468,115	+		CA265_RS05965	0.17	+0.5
1,468,188	-		CA265_RS05965	0.20	+0.2
1,468,239	-		CA265_RS05965	0.22	+0.1
1,468,272	+		CA265_RS05965	0.24	+0.4
1,468,273	-		CA265_RS05965	0.24	-0.9
1,468,381	-		CA265_RS05965	0.28	+0.2
1,468,408	+		CA265_RS05965	0.29	-0.1
1,468,409	-		CA265_RS05965	0.30	+0.3
1,468,409	-		CA265_RS05965	0.30	-0.2
1,468,409	-		CA265_RS05965	0.30	+0.3
1,468,478	+		CA265_RS05965	0.32	+0.5