Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04980

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
1,184,023	+				-1.0
1,184,024	-		CA265_RS04975	0.66	+0.8
1,184,024	-		CA265_RS04975	0.66	+1.0
1,184,090	+		CA265_RS04975	0.70	+0.5
1,184,183	+		CA265_RS04975	0.76	-0.3
1,184,184	-		CA265_RS04975	0.77	+0.0
1,184,209	+		CA265_RS04975	0.78	-0.5
1,184,213	+		CA265_RS04975	0.78	-0.5
1,184,227	-		CA265_RS04975	0.79	+0.1
1,184,308	+		CA265_RS04975	0.85	+0.4
1,184,404	-				-0.2
1,184,404	-				+0.3
1,184,447	+				-0.0
1,184,469	+				+0.2
1,184,470	-				-0.1
1,184,518	-				-0.2
1,184,518	-				+0.9
1,184,537	+				-0.1
1,184,549	-				+0.4
1,184,675	-				+0.4
1,184,753	-				-0.5
1,184,786	-				-1.9
1,184,820	-				+0.2
1,184,827	-				-1.0
1,184,831	-				+0.8
1,184,831	-				-1.0
1,184,863	+				-1.8
1,184,878	-				+1.3
1,184,944	+				-0.0
1,184,945	-				+0.8
1,184,959	+				-0.1
1,184,960	-				-0.3
1,184,984	+				-0.2
1,184,995	+				-0.7
1,185,075	+		CA265_RS04980	0.13	-2.9
1,185,087	+		CA265_RS04980	0.15	-3.7
1,185,088	-		CA265_RS04980	0.15	-3.3
1,185,096	+		CA265_RS04980	0.16	+1.3
1,185,097	-		CA265_RS04980	0.16	-4.4
1,185,117	+		CA265_RS04980	0.20	-1.6
1,185,201	+		CA265_RS04980	0.33	-2.7
1,185,201	+		CA265_RS04980	0.33	-3.3
1,185,202	-		CA265_RS04980	0.33	-3.5
1,185,232	+		CA265_RS04980	0.38	-1.0
1,185,253	-		CA265_RS04980	0.42	-1.7
1,185,308	+		CA265_RS04980	0.50	-1.2
1,185,328	-		CA265_RS04980	0.54	-3.0
1,185,368	-		CA265_RS04980	0.60	-2.6
1,185,464	-		CA265_RS04980	0.76	-1.9
1,185,488	-		CA265_RS04980	0.80	-2.8
1,185,543	-		CA265_RS04980	0.89	-3.3
1,185,642	-				-0.6
1,185,721	+		CA265_RS04985	0.15	-0.3
1,185,825	+		CA265_RS04985	0.29	+0.5
1,185,831	-		CA265_RS04985	0.30	+0.3
1,185,840	+		CA265_RS04985	0.31	-0.3
1,185,845	+		CA265_RS04985	0.31	-1.3
1,185,885	+		CA265_RS04985	0.37	-0.9
1,185,970	+		CA265_RS04985	0.48	-0.4
1,185,993	+		CA265_RS04985	0.51	-0.1
1,186,026	+		CA265_RS04985	0.56	+0.2
1,186,026	+		CA265_RS04985	0.56	-1.0
1,186,027	-		CA265_RS04985	0.56	-0.8
1,186,085	-		CA265_RS04985	0.64	-0.3
1,186,138	+		CA265_RS04985	0.71	-0.7
1,186,139	-		CA265_RS04985	0.71	-0.6
1,186,143	+		CA265_RS04985	0.72	+0.3
1,186,185	+		CA265_RS04985	0.78	-0.1
1,186,186	-		CA265_RS04985	0.78	+0.1
1,186,274	+		CA265_RS04985	0.90	-0.5
1,186,277	+				-0.8
1,186,277	+				-0.5
1,186,306	-				+0.1
1,186,348	+				-0.3
1,186,349	-				+0.1
1,186,349	-				+0.3
1,186,349	-				+0.5
1,186,352	-				+0.4
1,186,379	+				-0.6
1,186,379	+				-0.5
1,186,384	+				-0.3
1,186,387	+				+0.0
1,186,387	+				+0.3
1,186,388	-				-0.1
1,186,410	+				-3.2