Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00356 and SMc00357 are separated by 161 nucleotides SMc00357 and SMc00358 are separated by 212 nucleotides
SMc00356: SMc00356 - lysyl-tRNA synthetase, at 311,037 to 312,089
SMc00356
SMc00357: SMc00357 - elongation factor P, at 312,251 to 312,820
SMc00357
SMc00358: SMc00358 - cyclopropane-fatty-acyl-phospholipid synthase, at 313,033 to 314,274
SMc00358
Position (kb) 312
313 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 311.303 kb on - strand, within SMc00356 at 311.303 kb on - strand, within SMc00356 at 311.303 kb on - strand, within SMc00356 at 311.459 kb on + strand, within SMc00356 at 311.459 kb on + strand, within SMc00356 at 311.635 kb on + strand, within SMc00356 at 311.635 kb on + strand, within SMc00356 at 311.786 kb on - strand, within SMc00356 at 311.866 kb on + strand, within SMc00356 at 312.140 kb on + strand at 312.140 kb on + strand at 312.140 kb on + strand at 312.229 kb on - strand at 312.237 kb on + strand at 312.893 kb on - strand at 312.991 kb on - strand at 312.991 kb on - strand at 312.991 kb on - strand at 313.050 kb on + strand at 313.050 kb on + strand at 313.050 kb on + strand at 313.050 kb on + strand at 313.051 kb on - strand at 313.083 kb on + strand at 313.216 kb on + strand, within SMc00358 at 313.217 kb on - strand, within SMc00358 at 313.217 kb on - strand, within SMc00358 at 313.217 kb on - strand, within SMc00358 at 313.217 kb on - strand, within SMc00358 at 313.219 kb on - strand, within SMc00358 at 313.219 kb on - strand, within SMc00358 at 313.221 kb on - strand, within SMc00358 at 313.405 kb on + strand, within SMc00358 at 313.426 kb on + strand, within SMc00358 at 313.427 kb on - strand, within SMc00358 at 313.456 kb on + strand, within SMc00358 at 313.457 kb on - strand, within SMc00358 at 313.457 kb on - strand, within SMc00358 at 313.601 kb on - strand, within SMc00358 at 313.601 kb on - strand, within SMc00358 at 313.601 kb on - strand, within SMc00358 at 313.799 kb on - strand, within SMc00358
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 311,303 - SMc00356 0.25 -1.6 311,303 - SMc00356 0.25 -2.5 311,303 - SMc00356 0.25 -2.0 311,459 + SMc00356 0.40 -1.9 311,459 + SMc00356 0.40 -1.0 311,635 + SMc00356 0.57 -1.5 311,635 + SMc00356 0.57 -0.2 311,786 - SMc00356 0.71 -2.1 311,866 + SMc00356 0.79 -1.7 312,140 + -0.2 312,140 + -2.1 312,140 + -1.2 312,229 - -2.8 312,237 + +0.1 312,893 - -0.1 312,991 - -0.3 312,991 - +0.5 312,991 - +0.9 313,050 + +0.1 313,050 + +0.4 313,050 + +0.2 313,050 + +0.2 313,051 - +2.1 313,083 + +0.2 313,216 + SMc00358 0.15 +0.5 313,217 - SMc00358 0.15 -0.6 313,217 - SMc00358 0.15 +0.6 313,217 - SMc00358 0.15 +0.7 313,217 - SMc00358 0.15 +0.9 313,219 - SMc00358 0.15 +0.5 313,219 - SMc00358 0.15 +0.4 313,221 - SMc00358 0.15 +1.1 313,405 + SMc00358 0.30 -0.4 313,426 + SMc00358 0.32 +0.0 313,427 - SMc00358 0.32 +0.6 313,456 + SMc00358 0.34 +0.2 313,457 - SMc00358 0.34 +0.3 313,457 - SMc00358 0.34 -0.1 313,601 - SMc00358 0.46 +0.3 313,601 - SMc00358 0.46 -0.1 313,601 - SMc00358 0.46 +0.5 313,799 - SMc00358 0.62 +0.2
Or see this region's nucleotide sequence