Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0997 and SMa0998 are separated by 23 nucleotides SMa0998 and SMa1001 are separated by 348 nucleotides
SMa0997: SMa0997 - transposase, fragment, at 553,196 to 553,492
SMa0997
SMa0998: SMa0998 - ISRm25b transposase, at 553,516 to 554,085
SMa0998
SMa1001: SMa1001 - hypothetical protein, at 554,434 to 555,633
SMa1001
Position (kb) 553
554
555 Strain fitness (log2 ratio) -1
0
1 at 552.613 kb on + strand at 552.614 kb on - strand at 552.614 kb on - strand at 552.720 kb on + strand at 552.767 kb on - strand at 552.809 kb on - strand at 552.816 kb on + strand at 552.816 kb on + strand at 552.822 kb on + strand at 552.823 kb on - strand at 552.832 kb on + strand at 552.832 kb on + strand at 552.845 kb on - strand at 552.845 kb on - strand at 552.870 kb on + strand at 552.871 kb on - strand at 552.871 kb on - strand at 553.061 kb on + strand at 553.062 kb on - strand at 553.444 kb on + strand, within SMa0997 at 553.513 kb on + strand at 553.513 kb on + strand at 553.513 kb on + strand at 553.513 kb on + strand at 553.514 kb on - strand at 553.514 kb on - strand at 553.514 kb on - strand at 553.514 kb on - strand at 553.666 kb on + strand, within SMa0998 at 553.687 kb on + strand, within SMa0998 at 553.687 kb on + strand, within SMa0998 at 553.827 kb on - strand, within SMa0998 at 554.049 kb on + strand at 554.050 kb on - strand at 554.050 kb on - strand at 554.050 kb on - strand at 554.050 kb on - strand at 554.050 kb on - strand at 554.052 kb on + strand at 554.053 kb on - strand at 554.166 kb on - strand at 554.340 kb on + strand at 554.340 kb on + strand at 554.341 kb on - strand at 554.341 kb on - strand at 554.341 kb on - strand at 554.341 kb on - strand at 554.341 kb on - strand at 554.341 kb on - strand at 554.344 kb on + strand at 554.374 kb on - strand at 554.375 kb on + strand at 554.376 kb on - strand at 554.376 kb on - strand at 554.379 kb on + strand at 554.379 kb on + strand at 554.380 kb on - strand at 554.380 kb on - strand at 554.385 kb on - strand at 554.969 kb on + strand, within SMa1001
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 552,613 + -0.2 552,614 - -0.5 552,614 - -0.1 552,720 + -0.2 552,767 - -0.2 552,809 - -0.5 552,816 + -0.6 552,816 + +0.2 552,822 + +0.8 552,823 - +0.5 552,832 + +0.4 552,832 + +0.1 552,845 - +1.2 552,845 - -0.8 552,870 + +0.2 552,871 - -0.4 552,871 - -0.2 553,061 + -1.0 553,062 - +1.3 553,444 + SMa0997 0.84 -0.0 553,513 + -0.6 553,513 + +0.1 553,513 + -0.9 553,513 + -0.2 553,514 - +0.3 553,514 - +0.1 553,514 - +0.9 553,514 - +0.0 553,666 + SMa0998 0.26 +1.2 553,687 + SMa0998 0.30 +0.0 553,687 + SMa0998 0.30 +0.1 553,827 - SMa0998 0.55 +0.0 554,049 + -0.6 554,050 - -0.5 554,050 - +0.4 554,050 - +0.8 554,050 - -0.8 554,050 - +0.2 554,052 + +0.2 554,053 - +0.3 554,166 - -1.2 554,340 + -0.8 554,340 + -1.1 554,341 - +0.9 554,341 - +0.5 554,341 - +0.5 554,341 - +0.6 554,341 - -0.3 554,341 - -0.6 554,344 + -0.1 554,374 - -1.0 554,375 + -0.4 554,376 - -0.4 554,376 - -0.4 554,379 + -0.9 554,379 + -0.7 554,380 - -0.2 554,380 - -0.1 554,385 - -0.3 554,969 + SMa1001 0.45 -0.5
Or see this region's nucleotide sequence