Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20822 and SM_b20823 are separated by 9 nucleotides SM_b20823 and SM_b20824 are separated by 610 nucleotides
SM_b20822: SM_b20822 - cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833, at 611,046 to 611,870
_b20822
SM_b20823: SM_b20823 - cell surface saccharide synthesis protein, at 611,880 to 612,911
_b20823
SM_b20824: SM_b20824 - hypothetical protein, at 613,522 to 615,858
_b20824
Position (kb) 611
612
613 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 610.924 kb on + strand at 610.925 kb on - strand at 611.077 kb on + strand at 611.077 kb on + strand at 611.077 kb on + strand at 611.077 kb on + strand at 611.077 kb on + strand at 611.078 kb on - strand at 611.078 kb on - strand at 611.181 kb on + strand, within SM_b20822 at 611.182 kb on - strand, within SM_b20822 at 611.316 kb on + strand, within SM_b20822 at 611.376 kb on + strand, within SM_b20822 at 611.377 kb on - strand, within SM_b20822 at 611.377 kb on - strand, within SM_b20822 at 611.381 kb on + strand, within SM_b20822 at 611.471 kb on + strand, within SM_b20822 at 611.598 kb on + strand, within SM_b20822 at 611.782 kb on - strand, within SM_b20822 at 611.882 kb on - strand at 611.882 kb on - strand at 611.882 kb on - strand at 611.977 kb on + strand at 611.981 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.986 kb on + strand, within SM_b20823 at 611.986 kb on + strand, within SM_b20823 at 612.141 kb on - strand, within SM_b20823 at 612.148 kb on + strand, within SM_b20823 at 612.149 kb on - strand, within SM_b20823 at 612.149 kb on - strand, within SM_b20823 at 612.149 kb on - strand, within SM_b20823 at 612.149 kb on - strand, within SM_b20823 at 612.280 kb on + strand, within SM_b20823 at 612.461 kb on - strand, within SM_b20823 at 612.468 kb on - strand, within SM_b20823 at 612.541 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.589 kb on + strand, within SM_b20823 at 612.589 kb on + strand, within SM_b20823 at 612.590 kb on - strand, within SM_b20823 at 612.590 kb on - strand, within SM_b20823 at 612.593 kb on + strand, within SM_b20823 at 612.594 kb on - strand, within SM_b20823 at 612.676 kb on + strand, within SM_b20823 at 612.676 kb on + strand, within SM_b20823 at 612.676 kb on + strand, within SM_b20823 at 612.677 kb on - strand, within SM_b20823 at 612.681 kb on - strand, within SM_b20823 at 612.772 kb on - strand, within SM_b20823 at 612.772 kb on - strand, within SM_b20823 at 612.859 kb on - strand at 612.859 kb on - strand at 612.955 kb on - strand at 613.022 kb on + strand at 613.022 kb on + strand at 613.023 kb on - strand at 613.119 kb on + strand at 613.120 kb on - strand at 613.125 kb on + strand at 613.125 kb on + strand at 613.126 kb on - strand at 613.126 kb on - strand at 613.213 kb on + strand at 613.214 kb on - strand at 613.226 kb on - strand at 613.226 kb on - strand at 613.229 kb on + strand at 613.229 kb on + strand at 613.230 kb on - strand at 613.237 kb on + strand at 613.237 kb on + strand at 613.242 kb on + strand at 613.323 kb on + strand at 613.338 kb on + strand at 613.338 kb on + strand at 613.357 kb on + strand at 613.371 kb on + strand at 613.429 kb on - strand at 613.429 kb on - strand at 613.448 kb on - strand at 613.532 kb on - strand at 613.532 kb on - strand at 613.569 kb on - strand at 613.632 kb on + strand at 613.632 kb on + strand at 613.632 kb on + strand at 613.633 kb on - strand at 613.633 kb on - strand at 613.633 kb on - strand at 613.689 kb on + strand at 613.689 kb on + strand at 613.689 kb on + strand at 613.689 kb on + strand at 613.690 kb on - strand at 613.690 kb on - strand at 613.690 kb on - strand at 613.690 kb on - strand at 613.690 kb on - strand at 613.690 kb on - strand at 613.703 kb on - strand at 613.730 kb on + strand at 613.730 kb on + strand at 613.730 kb on + strand at 613.731 kb on - strand at 613.731 kb on - strand at 613.731 kb on - strand at 613.731 kb on - strand at 613.768 kb on - strand, within SM_b20824 at 613.813 kb on + strand, within SM_b20824 at 613.813 kb on + strand, within SM_b20824 at 613.813 kb on + strand, within SM_b20824 at 613.814 kb on - strand, within SM_b20824 at 613.823 kb on + strand, within SM_b20824
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 610,924 + +0.9 610,925 - -0.1 611,077 + -0.4 611,077 + -1.2 611,077 + -0.4 611,077 + -1.0 611,077 + -0.7 611,078 - -0.4 611,078 - -0.9 611,181 + SM_b20822 0.16 -0.6 611,182 - SM_b20822 0.16 -0.5 611,316 + SM_b20822 0.33 +0.2 611,376 + SM_b20822 0.40 -0.7 611,377 - SM_b20822 0.40 -0.2 611,377 - SM_b20822 0.40 +0.8 611,381 + SM_b20822 0.41 -0.1 611,471 + SM_b20822 0.52 -0.1 611,598 + SM_b20822 0.67 -0.1 611,782 - SM_b20822 0.89 -0.8 611,882 - +0.6 611,882 - +0.2 611,882 - -0.3 611,977 + -1.4 611,981 + -1.4 611,982 + -0.8 611,982 + -1.6 611,982 + -1.3 611,982 + -1.7 611,982 + -2.0 611,982 + -1.7 611,982 + -1.3 611,982 + -1.4 611,982 + -0.7 611,983 - -2.2 611,983 - -1.3 611,983 - -1.5 611,983 - -0.4 611,983 - -1.2 611,983 - -0.8 611,983 - -0.3 611,983 - -1.0 611,983 - +0.0 611,983 - -0.9 611,986 + SM_b20823 0.10 -0.6 611,986 + SM_b20823 0.10 +0.3 612,141 - SM_b20823 0.25 -1.0 612,148 + SM_b20823 0.26 -0.4 612,149 - SM_b20823 0.26 -2.2 612,149 - SM_b20823 0.26 -1.0 612,149 - SM_b20823 0.26 -0.6 612,149 - SM_b20823 0.26 -1.0 612,280 + SM_b20823 0.39 -1.3 612,461 - SM_b20823 0.56 -0.6 612,468 - SM_b20823 0.57 -1.2 612,541 + SM_b20823 0.64 -3.0 612,549 + SM_b20823 0.65 -0.2 612,549 + SM_b20823 0.65 -0.6 612,549 + SM_b20823 0.65 -0.9 612,549 + SM_b20823 0.65 -1.3 612,549 + SM_b20823 0.65 -1.4 612,589 + SM_b20823 0.69 -1.0 612,589 + SM_b20823 0.69 -1.7 612,590 - SM_b20823 0.69 -2.4 612,590 - SM_b20823 0.69 -0.2 612,593 + SM_b20823 0.69 -1.0 612,594 - SM_b20823 0.69 -1.5 612,676 + SM_b20823 0.77 -1.6 612,676 + SM_b20823 0.77 -1.0 612,676 + SM_b20823 0.77 -0.9 612,677 - SM_b20823 0.77 -0.3 612,681 - SM_b20823 0.78 -1.6 612,772 - SM_b20823 0.86 -0.7 612,772 - SM_b20823 0.86 -1.2 612,859 - -1.0 612,859 - -2.1 612,955 - -0.4 613,022 + -0.5 613,022 + -0.7 613,023 - -0.4 613,119 + +1.1 613,120 - -0.2 613,125 + -0.4 613,125 + -0.0 613,126 - +0.0 613,126 - -0.9 613,213 + +0.0 613,214 - +1.0 613,226 - +0.8 613,226 - +0.2 613,229 + -0.9 613,229 + -0.3 613,230 - -0.1 613,237 + +0.8 613,237 + -0.7 613,242 + -0.4 613,323 + -0.1 613,338 + +0.5 613,338 + +0.2 613,357 + +0.2 613,371 + -1.3 613,429 - -0.5 613,429 - -0.3 613,448 - +0.5 613,532 - +0.6 613,532 - +0.0 613,569 - -0.7 613,632 + -0.8 613,632 + +0.6 613,632 + -0.4 613,633 - +0.1 613,633 - -0.5 613,633 - +0.4 613,689 + -0.2 613,689 + -0.1 613,689 + -1.1 613,689 + +0.4 613,690 - +0.1 613,690 - -0.4 613,690 - +0.0 613,690 - +0.8 613,690 - +0.5 613,690 - -0.2 613,703 - +0.3 613,730 + -0.2 613,730 + -0.4 613,730 + -0.5 613,731 - +0.2 613,731 - -0.1 613,731 - +0.3 613,731 - -0.4 613,768 - SM_b20824 0.11 -0.7 613,813 + SM_b20824 0.12 +0.0 613,813 + SM_b20824 0.12 -0.5 613,813 + SM_b20824 0.12 +0.8 613,814 - SM_b20824 0.12 +0.1 613,823 + SM_b20824 0.13 -0.0
Or see this region's nucleotide sequence