Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3250

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
3,758,302	+		Pf6N2E2_3249	0.30	+1.5
3,758,303	-		Pf6N2E2_3249	0.30	+1.0
3,758,303	-		Pf6N2E2_3249	0.30	-0.0
3,758,303	-		Pf6N2E2_3249	0.30	-0.2
3,758,390	-		Pf6N2E2_3249	0.41	+1.3
3,758,503	+		Pf6N2E2_3249	0.55	-0.3
3,758,503	+		Pf6N2E2_3249	0.55	-0.8
3,758,504	-		Pf6N2E2_3249	0.55	+0.5
3,758,504	-		Pf6N2E2_3249	0.55	-0.2
3,758,504	-		Pf6N2E2_3249	0.55	+1.0
3,758,711	-		Pf6N2E2_3249	0.80	+0.7
3,758,722	+		Pf6N2E2_3249	0.81	+0.2
3,758,722	+		Pf6N2E2_3249	0.81	+0.6
3,758,722	+		Pf6N2E2_3249	0.81	-0.3
3,758,723	-		Pf6N2E2_3249	0.81	-0.9
3,758,764	+		Pf6N2E2_3249	0.87	+0.1
3,758,764	+		Pf6N2E2_3249	0.87	-0.4
3,758,764	+		Pf6N2E2_3249	0.87	+0.2
3,758,764	+		Pf6N2E2_3249	0.87	-1.6
3,758,764	+		Pf6N2E2_3249	0.87	-1.3
3,758,765	-		Pf6N2E2_3249	0.87	-1.5
3,758,765	-		Pf6N2E2_3249	0.87	+0.9
3,758,765	-		Pf6N2E2_3249	0.87	-0.1
3,758,765	-		Pf6N2E2_3249	0.87	-0.5
3,758,765	-		Pf6N2E2_3249	0.87	-1.0
3,758,765	-		Pf6N2E2_3249	0.87	-0.2
3,758,805	-				-1.5
3,758,875	+				+0.3
3,758,876	-				+0.1
3,758,902	+				+0.8
3,758,902	+				-0.7
3,758,903	-				-0.1
3,758,908	-				-0.0
3,758,908	-				-0.6
3,758,934	+				+1.7
3,758,934	+				+0.7
3,758,934	+				+1.2
3,758,934	+				+0.7
3,758,934	+				+0.8
3,758,935	-				-0.3
3,758,935	-				-0.4
3,758,935	-				-0.6
3,758,935	-				+0.5
3,758,938	+				+0.8
3,758,938	+				+0.2
3,758,938	+				+0.8
3,758,938	+				+1.2
3,758,938	+				+0.5
3,758,938	+				-0.0
3,758,939	-				-0.1
3,758,939	-				+1.1
3,758,939	-				-0.4
3,758,939	-				+0.5
3,758,939	-				+0.8
3,758,939	-				+0.3
3,758,939	-				-0.2
3,758,949	+				+0.5
3,758,949	+				-0.5
3,758,950	-				-0.1
3,758,993	+				+0.4
3,758,993	+				-1.0
3,758,993	+				+0.9
3,758,993	+				-0.7
3,758,993	+				+2.0
3,758,993	+				+0.5
3,758,993	+				+0.8
3,758,994	-				+1.2
3,758,994	-				-0.2
3,759,001	+				-0.0
3,759,001	+				+0.3
3,759,001	+				+1.1
3,759,091	-				-2.6
3,759,460	+		Pf6N2E2_3250	0.17	+0.5
3,759,461	-		Pf6N2E2_3250	0.17	+0.4
3,759,461	-		Pf6N2E2_3250	0.17	-0.6
3,759,461	-		Pf6N2E2_3250	0.17	-0.3
3,759,505	+		Pf6N2E2_3250	0.19	+0.4
3,759,505	+		Pf6N2E2_3250	0.19	-4.1
3,759,505	+		Pf6N2E2_3250	0.19	+0.4
3,759,505	+		Pf6N2E2_3250	0.19	+1.5
3,759,505	+		Pf6N2E2_3250	0.19	-0.8
3,759,505	+		Pf6N2E2_3250	0.19	+0.2
3,759,505	+		Pf6N2E2_3250	0.19	+1.0
3,759,506	-		Pf6N2E2_3250	0.19	-0.6
3,759,506	-		Pf6N2E2_3250	0.19	+0.3
3,759,506	-		Pf6N2E2_3250	0.19	+0.4
3,759,506	-		Pf6N2E2_3250	0.19	+1.5
3,759,506	-		Pf6N2E2_3250	0.19	+0.3
3,759,506	-		Pf6N2E2_3250	0.19	-0.6
3,759,623	+		Pf6N2E2_3250	0.25	+1.3
3,759,623	+		Pf6N2E2_3250	0.25	+0.6
3,759,623	+		Pf6N2E2_3250	0.25	-0.7
3,759,652	+		Pf6N2E2_3250	0.26	-0.3
3,759,652	+		Pf6N2E2_3250	0.26	+0.1
3,759,655	+		Pf6N2E2_3250	0.26	+0.9
3,759,655	+		Pf6N2E2_3250	0.26	+1.2
3,759,655	+		Pf6N2E2_3250	0.26	-1.6
3,759,655	+		Pf6N2E2_3250	0.26	+0.6
3,759,655	+		Pf6N2E2_3250	0.26	-1.8
3,759,655	+		Pf6N2E2_3250	0.26	+1.5
3,759,656	-		Pf6N2E2_3250	0.26	+0.2
3,759,656	-		Pf6N2E2_3250	0.26	+0.6
3,759,656	-		Pf6N2E2_3250	0.26	+0.0
3,759,656	-		Pf6N2E2_3250	0.26	+0.9
3,759,656	-		Pf6N2E2_3250	0.26	+0.6
3,759,781	-		Pf6N2E2_3250	0.32	+0.6
3,759,847	+		Pf6N2E2_3250	0.35	-0.6
3,759,847	+		Pf6N2E2_3250	0.35	+2.2
3,759,886	-		Pf6N2E2_3250	0.37	+1.9
3,759,886	-		Pf6N2E2_3250	0.37	-0.0
3,760,000	+		Pf6N2E2_3250	0.42	+2.0
3,760,001	-		Pf6N2E2_3250	0.43	+0.8
3,760,036	+		Pf6N2E2_3250	0.44	-0.5
3,760,036	+		Pf6N2E2_3250	0.44	-0.3
3,760,036	+		Pf6N2E2_3250	0.44	+1.0
3,760,036	+		Pf6N2E2_3250	0.44	+1.0
3,760,036	+		Pf6N2E2_3250	0.44	+1.1
3,760,036	+		Pf6N2E2_3250	0.44	+0.3
3,760,037	-		Pf6N2E2_3250	0.44	-0.6
3,760,037	-		Pf6N2E2_3250	0.44	+0.0
3,760,037	-		Pf6N2E2_3250	0.44	+0.3
3,760,037	-		Pf6N2E2_3250	0.44	+2.2
3,760,037	-		Pf6N2E2_3250	0.44	-0.3
3,760,037	-		Pf6N2E2_3250	0.44	+1.0
3,760,037	-		Pf6N2E2_3250	0.44	+0.5
3,760,362	+		Pf6N2E2_3250	0.59	+1.0
3,760,363	-		Pf6N2E2_3250	0.59	+0.0
3,760,363	-		Pf6N2E2_3250	0.59	-0.2
3,760,363	-		Pf6N2E2_3250	0.59	-0.8
3,760,685	+		Pf6N2E2_3250	0.75	+0.1
3,760,686	-		Pf6N2E2_3250	0.75	-0.1
3,760,686	-		Pf6N2E2_3250	0.75	-0.8
3,761,372	+				+1.5
3,761,373	-				+0.0
3,761,689	+		Pf6N2E2_3251	0.26	-1.6
3,761,690	-		Pf6N2E2_3251	0.26	-2.8
3,761,920	+		Pf6N2E2_3251	0.48	-2.1
3,761,920	+		Pf6N2E2_3251	0.48	-2.1
3,761,920	+		Pf6N2E2_3251	0.48	-2.2
3,761,920	+		Pf6N2E2_3251	0.48	-1.7
3,761,920	+		Pf6N2E2_3251	0.48	-3.0
3,761,920	+		Pf6N2E2_3251	0.48	-1.1
3,761,920	+		Pf6N2E2_3251	0.48	-2.1
3,761,920	+		Pf6N2E2_3251	0.48	-3.9
3,761,920	+		Pf6N2E2_3251	0.48	-3.7
3,761,920	+		Pf6N2E2_3251	0.48	-1.6
3,761,921	-		Pf6N2E2_3251	0.48	-1.1
3,761,921	-		Pf6N2E2_3251	0.48	-1.4
3,761,921	-		Pf6N2E2_3251	0.48	-3.1
3,762,049	+		Pf6N2E2_3251	0.60	-1.8
3,762,109	+		Pf6N2E2_3251	0.66	-3.1
3,762,121	+		Pf6N2E2_3251	0.67	-1.6
3,762,121	+		Pf6N2E2_3251	0.67	-0.4
3,762,122	-		Pf6N2E2_3251	0.67	-2.2
3,762,130	+		Pf6N2E2_3251	0.68	-2.5
3,762,131	-		Pf6N2E2_3251	0.68	-1.4
3,762,131	-		Pf6N2E2_3251	0.68	-3.6
3,762,139	+		Pf6N2E2_3251	0.68	-3.5
3,762,139	+		Pf6N2E2_3251	0.68	-0.5
3,762,139	+		Pf6N2E2_3251	0.68	-2.2
3,762,139	+		Pf6N2E2_3251	0.68	-4.3
3,762,140	-		Pf6N2E2_3251	0.69	-2.9
3,762,222	-		Pf6N2E2_3251	0.76	-1.7