Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02150 and HSERO_RS02155 are separated by 233 nucleotides HSERO_RS02155 and HSERO_RS02160 are separated by 108 nucleotides
HSERO_RS02150: HSERO_RS02150 - MFS transporter, at 468,153 to 469,328
_RS02150
HSERO_RS02155: HSERO_RS02155 - chorismate mutase, at 469,562 to 470,131
_RS02155
HSERO_RS02160: HSERO_RS02160 - DNA-dependent helicase, at 470,240 to 472,519
_RS02160
Position (kb) 469
470
471 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 468.622 kb on - strand, within HSERO_RS02150 at 468.627 kb on - strand, within HSERO_RS02150 at 468.685 kb on - strand, within HSERO_RS02150 at 468.686 kb on - strand, within HSERO_RS02150 at 468.715 kb on - strand, within HSERO_RS02150 at 468.842 kb on - strand, within HSERO_RS02150 at 468.842 kb on - strand, within HSERO_RS02150 at 468.859 kb on + strand, within HSERO_RS02150 at 468.877 kb on - strand at 469.051 kb on - strand, within HSERO_RS02150 at 469.051 kb on - strand, within HSERO_RS02150 at 469.162 kb on + strand, within HSERO_RS02150 at 469.214 kb on + strand at 469.627 kb on + strand, within HSERO_RS02155 at 469.750 kb on - strand, within HSERO_RS02155 at 469.843 kb on + strand, within HSERO_RS02155 at 469.999 kb on - strand, within HSERO_RS02155 at 470.170 kb on + strand at 470.193 kb on - strand at 470.193 kb on - strand at 470.254 kb on + strand at 470.460 kb on - strand at 470.510 kb on - strand, within HSERO_RS02160 at 470.588 kb on - strand, within HSERO_RS02160
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 468,622 - HSERO_RS02150 0.40 -0.0 468,627 - HSERO_RS02150 0.40 -0.1 468,685 - HSERO_RS02150 0.45 -0.3 468,686 - HSERO_RS02150 0.45 +0.3 468,715 - HSERO_RS02150 0.48 +0.3 468,842 - HSERO_RS02150 0.59 +0.0 468,842 - HSERO_RS02150 0.59 +0.4 468,859 + HSERO_RS02150 0.60 -0.4 468,877 - +1.5 469,051 - HSERO_RS02150 0.76 +0.4 469,051 - HSERO_RS02150 0.76 +0.7 469,162 + HSERO_RS02150 0.86 -1.0 469,214 + +1.3 469,627 + HSERO_RS02155 0.11 +0.3 469,750 - HSERO_RS02155 0.33 -0.8 469,843 + HSERO_RS02155 0.49 -0.2 469,999 - HSERO_RS02155 0.77 +0.4 470,170 + -0.2 470,193 - -0.5 470,193 - +0.3 470,254 + +0.0 470,460 - -1.1 470,510 - HSERO_RS02160 0.12 -4.2 470,588 - HSERO_RS02160 0.15 -4.7
Or see this region's nucleotide sequence