Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03696

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,861,731	+		CCNA_03695	0.42	+0.1
3,861,733	+		CCNA_03695	0.42	-0.1
3,861,739	-		CCNA_03695	0.42	-2.3
3,861,756	+		CCNA_03695	0.43	-0.4
3,861,780	+		CCNA_03695	0.45	-0.3
3,861,788	-		CCNA_03695	0.45	+0.3
3,861,788	-		CCNA_03695	0.45	-0.7
3,861,806	+		CCNA_03695	0.47	+0.9
3,861,806	+		CCNA_03695	0.47	-0.0
3,861,828	-		CCNA_03695	0.48	-1.3
3,861,855	+		CCNA_03695	0.50	-0.4
3,861,862	-		CCNA_03695	0.50	-3.2
3,861,862	-		CCNA_03695	0.50	-1.3
3,861,876	+		CCNA_03695	0.51	-1.5
3,861,876	+		CCNA_03695	0.51	+0.3
3,861,876	+		CCNA_03695	0.51	+0.3
3,861,884	-		CCNA_03695	0.52	+0.0
3,861,884	-		CCNA_03695	0.52	-1.9
3,861,884	-		CCNA_03695	0.52	-0.6
3,861,932	+		CCNA_03695	0.55	-2.4
3,861,942	+		CCNA_03695	0.55	-1.4
3,861,953	+		CCNA_03695	0.56	-1.8
3,861,953	+		CCNA_03695	0.56	-0.0
3,861,953	+		CCNA_03695	0.56	-1.9
3,861,961	-		CCNA_03695	0.57	-1.5
3,861,961	-		CCNA_03695	0.57	-1.8
3,861,963	+		CCNA_03695	0.57	-0.4
3,861,975	-		CCNA_03695	0.58	-1.4
3,861,977	+		CCNA_03695	0.58	+0.6
3,861,978	+		CCNA_03695	0.58	-1.6
3,861,986	-		CCNA_03695	0.58	-2.2
3,861,986	-		CCNA_03695	0.58	-0.5
3,861,986	-		CCNA_03695	0.58	-1.0
3,861,994	+		CCNA_03695	0.59	-0.9
3,862,002	-		CCNA_03695	0.59	-2.2
3,862,002	-		CCNA_03695	0.59	-2.2
3,862,002	-		CCNA_03695	0.59	-1.4
3,862,005	+		CCNA_03695	0.60	-0.8
3,862,044	+		CCNA_03695	0.62	-2.7
3,862,046	-		CCNA_03695	0.62	-1.2
3,862,067	-		CCNA_03695	0.64	-0.6
3,862,077	-		CCNA_03695	0.64	-1.0
3,862,081	+		CCNA_03695	0.65	-0.5
3,862,082	+		CCNA_03695	0.65	-2.6
3,862,082	+		CCNA_03695	0.65	-0.3
3,862,082	+		CCNA_03695	0.65	-0.4
3,862,082	+		CCNA_03695	0.65	-0.7
3,862,082	+		CCNA_03695	0.65	-1.4
3,862,082	+		CCNA_03695	0.65	-3.2
3,862,082	+		CCNA_03695	0.65	-0.9
3,862,082	+		CCNA_03695	0.65	-0.6
3,862,082	+		CCNA_03695	0.65	-1.8
3,862,089	-		CCNA_03695	0.65	-1.1
3,862,090	-		CCNA_03695	0.65	-0.7
3,862,090	-		CCNA_03695	0.65	-2.3
3,862,090	-		CCNA_03695	0.65	-3.3
3,862,090	-		CCNA_03695	0.65	-3.9
3,862,090	-		CCNA_03695	0.65	-1.3
3,862,090	-		CCNA_03695	0.65	-1.5
3,862,090	-		CCNA_03695	0.65	+0.3
3,862,090	-		CCNA_03695	0.65	-0.6
3,862,090	-		CCNA_03695	0.65	-2.6
3,862,090	-		CCNA_03695	0.65	-1.6
3,862,090	-		CCNA_03695	0.65	-1.5
3,862,090	-		CCNA_03695	0.65	-1.7
3,862,090	-		CCNA_03695	0.65	-2.4
3,862,090	-		CCNA_03695	0.65	-2.5
3,862,090	-		CCNA_03695	0.65	+0.5
3,862,090	-		CCNA_03695	0.65	+1.1
3,862,095	+		CCNA_03695	0.66	-0.9
3,862,109	+		CCNA_03695	0.66	-0.7
3,862,109	+		CCNA_03695	0.66	-0.2
3,862,119	+		CCNA_03695	0.67	-1.4
3,862,128	+		CCNA_03695	0.68	-0.8
3,862,152	-		CCNA_03695	0.69	-0.9
3,862,166	-		CCNA_03695	0.70	-3.2
3,862,193	-		CCNA_03695	0.72	-1.8
3,862,218	-		CCNA_03695	0.74	-0.8
3,862,218	-		CCNA_03695	0.74	-1.2
3,862,331	+		CCNA_03695	0.81	-1.2
3,862,333	+		CCNA_03695	0.81	-0.7
3,862,333	+		CCNA_03695	0.81	+1.1
3,862,333	+		CCNA_03695	0.81	-0.7
3,862,339	-		CCNA_03695	0.82	-1.7
3,862,339	-		CCNA_03695	0.82	-0.7
3,862,341	-		CCNA_03695	0.82	-2.5
3,862,341	-		CCNA_03695	0.82	-2.3
3,862,341	-		CCNA_03695	0.82	-0.0
3,862,352	+		CCNA_03695	0.82	-1.9
3,862,352	+		CCNA_03695	0.82	-0.8
3,862,352	+		CCNA_03695	0.82	-1.0
3,862,397	+		CCNA_03695	0.85	+0.1
3,862,448	-		CCNA_03695	0.89	-1.2
3,862,451	+		CCNA_03695	0.89	-0.0
3,862,456	+		CCNA_03695	0.89	-1.8
3,862,456	+		CCNA_03695	0.89	-1.1
3,862,456	+		CCNA_03695	0.89	-1.3
3,862,456	+		CCNA_03695	0.89	-1.1
3,862,464	-		CCNA_03695	0.90	-2.2
3,862,464	-		CCNA_03695	0.90	-1.2
3,862,464	-		CCNA_03695	0.90	-1.9
3,862,464	-		CCNA_03695	0.90	+0.9
3,862,464	-		CCNA_03695	0.90	-1.0
3,862,464	-		CCNA_03695	0.90	-0.7
3,862,465	-		CCNA_03695	0.90	+0.6
3,862,516	+				+1.4
3,862,543	-				-0.8
3,862,550	-				+0.5
3,862,567	+				+0.1
3,862,575	-				-2.6
3,862,575	-				-0.1
3,862,587	+				+2.1
3,862,590	-				-0.7
3,862,593	+				+1.3
3,862,593	+				-0.0
3,862,593	+				-0.3
3,862,601	-				-3.1
3,862,601	-				+2.3
3,862,601	-				-1.9
3,862,612	+				+2.0
3,862,617	+				+0.5
3,862,617	+				+2.1
3,862,620	-				-1.5
3,862,625	-				-0.3
3,862,627	-				+0.3
3,862,661	+				+0.1
3,862,690	+				+0.4
3,862,690	+				-0.5
3,862,690	+				-1.0
3,862,698	-				-0.3
3,862,698	-				-0.7
3,862,716	+				-0.9
3,862,716	+				+0.6
3,862,716	+				-0.3
3,862,716	+				-0.9
3,862,716	+				+1.4
3,862,724	-				-0.7
3,862,734	-				-1.2
3,862,734	-				+0.3
3,862,741	-				-0.0
3,862,775	-				-0.7
3,862,812	+				-0.3
3,862,895	+				-1.1
3,862,895	+				-2.1
3,862,895	+				-0.4
3,862,903	-				-1.9
3,862,903	-				-2.2
3,862,903	-				-2.1
3,863,013	+		CCNA_03696	0.15	-1.5
3,863,013	+		CCNA_03696	0.15	-1.6
3,863,013	+		CCNA_03696	0.15	-2.7
3,863,013	+		CCNA_03696	0.15	-1.7
3,863,019	+		CCNA_03696	0.15	-3.5
3,863,021	-		CCNA_03696	0.15	-0.9
3,863,021	-		CCNA_03696	0.15	-1.0
3,863,045	+		CCNA_03696	0.16	-0.0
3,863,059	+		CCNA_03696	0.17	-1.6
3,863,065	-		CCNA_03696	0.17	-2.5
3,863,067	-		CCNA_03696	0.17	-2.3
3,863,067	-		CCNA_03696	0.17	-0.0
3,863,117	-		CCNA_03696	0.20	-0.4
3,863,126	+		CCNA_03696	0.20	-2.9
3,863,140	+		CCNA_03696	0.21	-0.8
3,863,148	-		CCNA_03696	0.21	-2.2
3,863,195	+		CCNA_03696	0.24	-1.4
3,863,195	+		CCNA_03696	0.24	-2.0
3,863,195	+		CCNA_03696	0.24	-1.2
3,863,203	-		CCNA_03696	0.24	+0.1
3,863,203	-		CCNA_03696	0.24	+0.3
3,863,214	+		CCNA_03696	0.25	-2.4
3,863,235	+		CCNA_03696	0.26	-1.8
3,863,256	+		CCNA_03696	0.27	-1.6
3,863,256	+		CCNA_03696	0.27	-0.6
3,863,354	-		CCNA_03696	0.32	-1.4
3,863,357	-		CCNA_03696	0.32	-0.3
3,863,359	+		CCNA_03696	0.32	-1.2
3,863,367	-		CCNA_03696	0.33	+0.5
3,863,376	+		CCNA_03696	0.33	-1.4
3,863,376	+		CCNA_03696	0.33	-1.5
3,863,398	+		CCNA_03696	0.34	-1.7
3,863,419	-		CCNA_03696	0.35	-2.0
3,863,452	+		CCNA_03696	0.37	-1.7
3,863,468	+		CCNA_03696	0.38	-1.2
3,863,502	+		CCNA_03696	0.40	-1.9
3,863,510	+		CCNA_03696	0.40	-1.9
3,863,510	+		CCNA_03696	0.40	-0.6
3,863,511	+		CCNA_03696	0.40	-2.5
3,863,512	-		CCNA_03696	0.40	-2.9
3,863,519	-		CCNA_03696	0.41	-1.3
3,863,526	-		CCNA_03696	0.41	-1.7
3,863,527	+		CCNA_03696	0.41	-2.9
3,863,537	+		CCNA_03696	0.41	-1.6
3,863,537	+		CCNA_03696	0.41	-3.7
3,863,537	+		CCNA_03696	0.41	-0.8
3,863,537	+		CCNA_03696	0.41	-0.8
3,863,537	+		CCNA_03696	0.41	-1.3
3,863,537	+		CCNA_03696	0.41	+0.1
3,863,537	+		CCNA_03696	0.41	+0.3
3,863,537	+		CCNA_03696	0.41	-1.1
3,863,537	+		CCNA_03696	0.41	-2.4
3,863,537	+		CCNA_03696	0.41	-1.9
3,863,537	+		CCNA_03696	0.41	-1.5
3,863,537	+		CCNA_03696	0.41	-0.2
3,863,537	+		CCNA_03696	0.41	-0.8
3,863,537	+		CCNA_03696	0.41	-2.3
3,863,537	+		CCNA_03696	0.41	-0.2
3,863,545	-		CCNA_03696	0.42	-0.2
3,863,545	-		CCNA_03696	0.42	+1.7
3,863,545	-		CCNA_03696	0.42	-1.4
3,863,545	-		CCNA_03696	0.42	-1.9
3,863,545	-		CCNA_03696	0.42	+0.3
3,863,545	-		CCNA_03696	0.42	-1.4
3,863,545	-		CCNA_03696	0.42	-0.5
3,863,545	-		CCNA_03696	0.42	-2.8
3,863,545	-		CCNA_03696	0.42	-1.5
3,863,545	-		CCNA_03696	0.42	-0.9
3,863,545	-		CCNA_03696	0.42	-2.6
3,863,545	-		CCNA_03696	0.42	-3.0
3,863,545	-		CCNA_03696	0.42	-2.2
3,863,545	-		CCNA_03696	0.42	-1.3
3,863,545	-		CCNA_03696	0.42	-1.1
3,863,545	-		CCNA_03696	0.42	-0.5
3,863,545	-		CCNA_03696	0.42	-4.5
3,863,555	-		CCNA_03696	0.42	-0.8
3,863,568	+		CCNA_03696	0.43	-0.3
3,863,581	-		CCNA_03696	0.44	-3.7
3,863,590	+		CCNA_03696	0.44	-0.7
3,863,601	+		CCNA_03696	0.45	-3.0
3,863,601	+		CCNA_03696	0.45	-3.1
3,863,608	+		CCNA_03696	0.45	-0.3
3,863,625	+		CCNA_03696	0.46	-2.2
3,863,625	+		CCNA_03696	0.46	-1.8
3,863,625	+		CCNA_03696	0.46	+0.9
3,863,635	-		CCNA_03696	0.47	-1.9
3,863,638	+		CCNA_03696	0.47	-0.7
3,863,653	+		CCNA_03696	0.47	-2.6
3,863,661	+		CCNA_03696	0.48	-1.4
3,863,661	+		CCNA_03696	0.48	-2.4
3,863,661	+		CCNA_03696	0.48	-0.9
3,863,666	+		CCNA_03696	0.48	-2.8
3,863,666	+		CCNA_03696	0.48	-0.7
3,863,666	+		CCNA_03696	0.48	+0.2
3,863,674	-		CCNA_03696	0.49	-1.8
3,863,693	-		CCNA_03696	0.49	-2.3
3,863,706	+		CCNA_03696	0.50	-2.5
3,863,706	+		CCNA_03696	0.50	-4.5
3,863,706	+		CCNA_03696	0.50	-0.7
3,863,714	+		CCNA_03696	0.51	-3.1
3,863,714	-		CCNA_03696	0.51	-0.0
3,863,714	-		CCNA_03696	0.51	-1.4
3,863,721	+		CCNA_03696	0.51	+1.6
3,863,741	-		CCNA_03696	0.52	-0.2
3,863,752	+		CCNA_03696	0.53	-2.2
3,863,752	+		CCNA_03696	0.53	-1.5
3,863,770	+		CCNA_03696	0.53	-1.2
3,863,778	+		CCNA_03696	0.54	-1.1
3,863,778	+		CCNA_03696	0.54	-0.9
3,863,786	+		CCNA_03696	0.54	-1.9
3,863,786	+		CCNA_03696	0.54	-1.9
3,863,786	+		CCNA_03696	0.54	+0.2
3,863,796	+		CCNA_03696	0.55	-1.0
3,863,804	-		CCNA_03696	0.55	-3.8
3,863,829	+		CCNA_03696	0.56	-3.2
3,863,829	+		CCNA_03696	0.56	-0.7
3,863,837	-		CCNA_03696	0.57	-1.7
3,863,856	-		CCNA_03696	0.58	-1.8
3,863,871	+		CCNA_03696	0.59	-2.5
3,863,876	+		CCNA_03696	0.59	-2.1
3,863,889	+		CCNA_03696	0.60	-2.5
3,863,899	+		CCNA_03696	0.60	-1.9
3,863,906	+		CCNA_03696	0.60	-0.3
3,863,962	+		CCNA_03696	0.63	-1.2
3,863,970	-		CCNA_03696	0.64	-2.5
3,863,972	+		CCNA_03696	0.64	-0.8
3,864,036	+		CCNA_03696	0.67	-0.8
3,864,073	+		CCNA_03696	0.69	-2.1
3,864,090	+		CCNA_03696	0.70	-1.6
3,864,141	+		CCNA_03696	0.73	-1.7
3,864,141	+		CCNA_03696	0.73	-1.5
3,864,146	+		CCNA_03696	0.73	-1.1
3,864,154	-		CCNA_03696	0.73	-1.9
3,864,154	-		CCNA_03696	0.73	-1.0
3,864,180	+		CCNA_03696	0.75	-0.7
3,864,202	+		CCNA_03696	0.76	-1.3
3,864,220	-		CCNA_03696	0.77	-1.7
3,864,298	-		CCNA_03696	0.81	-0.7
3,864,303	+		CCNA_03696	0.81	-0.4
3,864,316	-		CCNA_03696	0.82	-1.9
3,864,320	+		CCNA_03696	0.82	-0.7
3,864,325	+		CCNA_03696	0.82	-0.9
3,864,392	+		CCNA_03696	0.85	-0.7
3,864,402	+		CCNA_03696	0.86	-1.2
3,864,418	-		CCNA_03696	0.87	-1.3
3,864,431	+		CCNA_03696	0.87	+0.3
3,864,433	-		CCNA_03696	0.88	-2.3
3,864,442	+		CCNA_03696	0.88	-1.9
3,864,485	+				-1.2
3,864,522	+				-1.8
3,864,523	+				-0.6
3,864,531	-				-1.7
3,864,533	+				-1.0
3,864,538	+				-1.4
3,864,541	-				+0.7
3,864,541	-				-0.3
3,864,541	-				-1.3
3,864,542	-				-2.0
3,864,605	+				-0.7
3,864,613	+				-1.0
3,864,621	-				-0.7
3,864,627	+				-1.3
3,864,668	+				-0.2
3,864,691	+				-0.3
3,864,729	-				-0.3
3,864,765	+		CCNA_03697	0.10	+0.8
3,864,765	+		CCNA_03697	0.10	+0.6
3,864,765	+		CCNA_03697	0.10	+0.2
3,864,765	+		CCNA_03697	0.10	+0.4
3,864,765	+		CCNA_03697	0.10	+0.1
3,864,765	+		CCNA_03697	0.10	+0.3
3,864,773	-		CCNA_03697	0.12	-0.2
3,864,773	-		CCNA_03697	0.12	-0.0
3,864,773	-		CCNA_03697	0.12	+0.0
3,864,814	+		CCNA_03697	0.19	+2.1
3,864,822	-		CCNA_03697	0.20	+1.4
3,864,842	+		CCNA_03697	0.24	-0.9
3,864,845	-		CCNA_03697	0.25	-0.0
3,864,855	-		CCNA_03697	0.26	-0.4
3,864,886	-		CCNA_03697	0.32	+0.4
3,864,888	+		CCNA_03697	0.32	+0.7
3,864,909	+		CCNA_03697	0.36	-0.2
3,864,926	+		CCNA_03697	0.39	+0.1
3,864,964	+		CCNA_03697	0.46	-0.3
3,864,964	+		CCNA_03697	0.46	+0.1
3,864,964	+		CCNA_03697	0.46	+0.2
3,864,964	+		CCNA_03697	0.46	+0.3
3,864,964	+		CCNA_03697	0.46	-0.2
3,864,964	+		CCNA_03697	0.46	-0.1
3,864,964	+		CCNA_03697	0.46	-0.2
3,864,964	+		CCNA_03697	0.46	+0.7
3,864,972	-		CCNA_03697	0.47	+0.7
3,864,972	-		CCNA_03697	0.47	-1.6
3,864,972	-		CCNA_03697	0.47	-0.2
3,864,972	-		CCNA_03697	0.47	-1.3
3,864,972	-		CCNA_03697	0.47	-1.3
3,864,972	-		CCNA_03697	0.47	-0.5
3,864,972	-		CCNA_03697	0.47	-0.3
3,864,972	-		CCNA_03697	0.47	-2.4
3,864,972	-		CCNA_03697	0.47	-0.3
3,864,972	-		CCNA_03697	0.47	+0.0
3,864,995	-		CCNA_03697	0.51	-1.5
3,865,140	+		CCNA_03697	0.77	+0.1
3,865,147	+		CCNA_03697	0.79	+0.7
3,865,155	+		CCNA_03697	0.80	+0.4
3,865,155	-		CCNA_03697	0.80	+1.9
3,865,155	-		CCNA_03697	0.80	-0.0
3,865,163	-		CCNA_03697	0.82	-0.3
3,865,188	+		CCNA_03697	0.86	-0.8
3,865,195	+		CCNA_03697	0.87	-1.0
3,865,293	-				-1.3
3,865,301	-		CCNA_03698	0.12	-1.4
3,865,311	-		CCNA_03698	0.14	-0.4
3,865,346	+		CCNA_03698	0.22	-1.0
3,865,348	+		CCNA_03698	0.23	-0.3
3,865,356	-		CCNA_03698	0.24	-1.7
3,865,378	-		CCNA_03698	0.29	-1.9
3,865,383	+		CCNA_03698	0.31	+0.7
3,865,460	-		CCNA_03698	0.48	-1.0
3,865,481	-		CCNA_03698	0.53	+0.1
3,865,486	-		CCNA_03698	0.54	-0.2
3,865,551	-		CCNA_03698	0.69	+1.1
3,865,634	-		CCNA_03698	0.88	-1.0