Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02891

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,037,086	-		CCNA_02888	0.85	-0.9
3,037,100	+		CCNA_02888	0.86	+1.3
3,037,101	+		CCNA_02888	0.86	+0.5
3,037,115	+		CCNA_02888	0.87	+0.1
3,037,163	+				+1.8
3,037,163	+				+0.0
3,037,170	+				+0.7
3,037,170	+				+0.4
3,037,170	+				+1.3
3,037,191	+				+0.2
3,037,221	-				+0.5
3,037,225	+				-0.8
3,037,241	-				+0.1
3,037,276	-				-0.3
3,037,317	+				-0.2
3,037,317	+				-2.5
3,037,325	-				-0.8
3,037,363	-				+0.5
3,037,378	-				+1.6
3,037,379	-				-0.1
3,037,380	-				-0.2
3,037,380	-				+2.1
3,037,380	-				+0.5
3,037,390	+				-0.5
3,037,393	-				-0.4
3,037,398	+				-1.2
3,037,404	-				+1.6
3,037,430	-				+1.2
3,037,434	+				+1.0
3,037,501	+				-1.4
3,037,513	+		CCNA_02889	0.12	-1.1
3,037,532	-		CCNA_02889	0.16	+2.4
3,037,535	+				+0.5
3,037,535	+		CCNA_02889	0.16	+0.7
3,037,543	-		CCNA_02889	0.18	+2.2
3,037,548	-		CCNA_02889	0.19	+1.5
3,037,553	-		CCNA_02889	0.20	+1.0
3,037,555	+		CCNA_02889	0.20	+0.7
3,037,563	-		CCNA_02889	0.22	+1.9
3,037,563	-		CCNA_02889	0.22	+1.8
3,037,563	-		CCNA_02889	0.22	+1.5
3,037,599	+		CCNA_02889	0.29	-0.9
3,037,606	-		CCNA_02889	0.30	+2.0
3,037,643	+		CCNA_02889	0.37	+0.5
3,037,666	+		CCNA_02889	0.42	+1.5
3,037,674	-		CCNA_02889	0.44	+0.8
3,037,674	-		CCNA_02889	0.44	+0.6
3,037,725	+		CCNA_02889	0.54	+0.8
3,037,733	-		CCNA_02889	0.55	+2.0
3,037,744	-		CCNA_02889	0.57	+0.9
3,037,750	-		CCNA_02889	0.59	+1.3
3,037,751	-		CCNA_02889	0.59	+0.7
3,037,763	+		CCNA_02889	0.61	-0.1
3,037,763	+		CCNA_02889	0.61	-1.6
3,037,763	+		CCNA_02889	0.61	-2.2
3,037,763	+		CCNA_02889	0.61	-1.6
3,037,763	+		CCNA_02889	0.61	-0.5
3,037,763	+		CCNA_02889	0.61	-0.6
3,037,771	-		CCNA_02889	0.63	+0.4
3,037,771	-		CCNA_02889	0.63	+0.6
3,037,778	+		CCNA_02889	0.64	-0.5
3,037,807	-		CCNA_02889	0.70	+0.5
3,037,862	+		CCNA_02889	0.81	-0.1
3,037,870	-		CCNA_02889	0.82	-0.7
3,037,891	+		CCNA_02889	0.86	+0.0
3,037,892	+		CCNA_02889	0.87	-0.3
3,037,903	+		CCNA_02889	0.89	+0.0
3,037,905	-		CCNA_02889	0.89	+1.5
3,037,921	+				-1.1
3,037,936	+				-1.3
3,037,962	-				-0.1
3,037,973	+				+0.2
3,037,977	+				-3.4
3,038,041	-				-1.3
3,038,076	+				-0.6
3,038,088	+				+1.1
3,038,096	-				-3.5
3,038,097	-				-0.6
3,038,097	-				+0.2
3,038,097	-				+1.5
3,038,116	-				+1.5
3,038,139	-				+0.5
3,038,139	-				+0.0
3,038,148	-				-0.5
3,038,212	-				+0.4
3,038,215	+				-1.6
3,038,223	-				-0.9
3,038,241	+				-1.5
3,038,246	+				+0.5
3,038,254	-				+0.1
3,038,277	-		CCNA_02891	0.11	+1.2
3,038,351	+		CCNA_02891	0.15	-1.2
3,038,359	-		CCNA_02891	0.15	-0.5
3,038,385	-		CCNA_02891	0.17	-0.4
3,038,405	-		CCNA_02891	0.18	+0.5
3,038,405	-		CCNA_02891	0.18	-0.2
3,038,435	-		CCNA_02891	0.19	-1.8
3,038,503	-		CCNA_02891	0.23	-1.0
3,038,517	+		CCNA_02891	0.24	-1.9
3,038,549	+		CCNA_02891	0.25	+1.0
3,038,557	-		CCNA_02891	0.26	-0.8
3,038,557	-		CCNA_02891	0.26	-0.3
3,038,564	-		CCNA_02891	0.26	-1.4
3,038,571	-		CCNA_02891	0.27	-0.5
3,038,576	+		CCNA_02891	0.27	+1.8
3,038,577	+		CCNA_02891	0.27	-1.1
3,038,583	+		CCNA_02891	0.27	+0.6
3,038,583	+		CCNA_02891	0.27	-0.5
3,038,583	+		CCNA_02891	0.27	-1.3
3,038,583	+		CCNA_02891	0.27	+1.2
3,038,583	+		CCNA_02891	0.27	-0.2
3,038,583	+		CCNA_02891	0.27	-1.9
3,038,583	+		CCNA_02891	0.27	+0.4
3,038,589	-		CCNA_02891	0.28	-1.1
3,038,591	-		CCNA_02891	0.28	+0.0
3,038,591	-		CCNA_02891	0.28	+2.1
3,038,591	-		CCNA_02891	0.28	-0.8
3,038,591	-		CCNA_02891	0.28	-1.8
3,038,591	-		CCNA_02891	0.28	+0.1
3,038,593	+		CCNA_02891	0.28	+0.5
3,038,606	-		CCNA_02891	0.29	-1.0
3,038,609	+		CCNA_02891	0.29	-0.3
3,038,609	+		CCNA_02891	0.29	-1.9
3,038,617	-		CCNA_02891	0.29	-0.4
3,038,619	+		CCNA_02891	0.29	-0.3
3,038,627	-		CCNA_02891	0.30	+1.2
3,038,627	-		CCNA_02891	0.30	+0.7
3,038,653	+		CCNA_02891	0.31	+0.1
3,038,661	-		CCNA_02891	0.31	+0.5
3,038,661	-		CCNA_02891	0.31	+0.4
3,038,663	+		CCNA_02891	0.32	+2.0
3,038,663	+		CCNA_02891	0.32	+1.5
3,038,684	-		CCNA_02891	0.33	+1.0
3,038,709	+		CCNA_02891	0.34	+0.0
3,038,711	+		CCNA_02891	0.34	-1.7
3,038,754	-		CCNA_02891	0.36	-1.0
3,038,782	+		CCNA_02891	0.38	-2.0
3,038,802	+		CCNA_02891	0.39	-0.6
3,038,802	+		CCNA_02891	0.39	-1.0
3,038,802	+		CCNA_02891	0.39	+1.0
3,038,802	+		CCNA_02891	0.39	-2.4
3,038,802	+		CCNA_02891	0.39	-2.2
3,038,802	+		CCNA_02891	0.39	-0.5
3,038,802	+		CCNA_02891	0.39	-1.3
3,038,805	-		CCNA_02891	0.39	-2.0
3,038,810	-		CCNA_02891	0.39	-0.4
3,038,810	-		CCNA_02891	0.39	-1.2
3,038,810	-		CCNA_02891	0.39	+0.0
3,038,810	-		CCNA_02891	0.39	+2.2
3,038,810	-		CCNA_02891	0.39	+0.6
3,038,810	-		CCNA_02891	0.39	+0.9
3,038,857	+		CCNA_02891	0.42	-1.0
3,038,886	+		CCNA_02891	0.43	+1.4
3,038,886	+		CCNA_02891	0.43	-3.5
3,038,894	-		CCNA_02891	0.44	-0.4
3,038,894	-		CCNA_02891	0.44	-0.2
3,038,901	-		CCNA_02891	0.44	-1.9
3,038,915	+		CCNA_02891	0.45	+0.0
3,038,917	-		CCNA_02891	0.45	-0.2
3,038,925	+		CCNA_02891	0.45	-1.5
3,038,925	-		CCNA_02891	0.45	-0.1
3,038,973	+		CCNA_02891	0.48	-0.4
3,038,997	+		CCNA_02891	0.49	-0.4
3,039,005	-		CCNA_02891	0.50	-0.1
3,039,028	+		CCNA_02891	0.51	-1.0
3,039,028	-		CCNA_02891	0.51	-2.4
3,039,042	+		CCNA_02891	0.52	-1.2
3,039,042	+		CCNA_02891	0.52	+0.2
3,039,050	-		CCNA_02891	0.52	+0.9
3,039,050	-		CCNA_02891	0.52	-1.4
3,039,065	-		CCNA_02891	0.53	-1.4
3,039,068	+		CCNA_02891	0.53	+0.9
3,039,088	+		CCNA_02891	0.54	-0.2
3,039,114	+		CCNA_02891	0.55	+1.1
3,039,114	+		CCNA_02891	0.55	-0.8
3,039,115	+		CCNA_02891	0.55	-0.5
3,039,122	-		CCNA_02891	0.56	-1.4
3,039,167	+		CCNA_02891	0.58	+0.4
3,039,175	+		CCNA_02891	0.59	+2.1
3,039,175	-		CCNA_02891	0.59	-1.5
3,039,214	-		CCNA_02891	0.61	+0.2
3,039,217	+		CCNA_02891	0.61	+0.4
3,039,217	+		CCNA_02891	0.61	-0.6
3,039,220	-		CCNA_02891	0.61	-2.7
3,039,225	-		CCNA_02891	0.61	+0.7
3,039,244	+		CCNA_02891	0.62	+0.7
3,039,285	+		CCNA_02891	0.64	-0.6
3,039,287	+		CCNA_02891	0.65	+0.6
3,039,337	+		CCNA_02891	0.67	-1.6
3,039,363	+		CCNA_02891	0.69	-0.8
3,039,369	+				+1.8
3,039,398	-		CCNA_02891	0.70	+1.5
3,039,419	-		CCNA_02891	0.72	-1.3
3,039,421	+		CCNA_02891	0.72	+0.8
3,039,538	+		CCNA_02891	0.78	-1.5
3,039,540	+		CCNA_02891	0.78	-0.9
3,039,546	-		CCNA_02891	0.78	+0.6
3,039,546	-		CCNA_02891	0.78	+0.5
3,039,546	-		CCNA_02891	0.78	-0.4
3,039,546	-		CCNA_02891	0.78	-0.6
3,039,614	+		CCNA_02891	0.82	-1.4
3,039,616	-		CCNA_02891	0.82	+0.2
3,039,633	-		CCNA_02891	0.83	+0.4
3,039,658	-		CCNA_02891	0.84	+0.3
3,039,674	+		CCNA_02891	0.85	-1.5
3,039,687	+		CCNA_02891	0.86	-1.2
3,039,696	+		CCNA_02891	0.86	-0.0
3,039,696	+		CCNA_02891	0.86	-1.1
3,039,696	+		CCNA_02891	0.86	+0.6
3,039,704	-		CCNA_02891	0.87	-1.5
3,039,724	+		CCNA_02891	0.88	-0.1
3,039,724	+		CCNA_02891	0.88	-1.8
3,039,732	-		CCNA_02891	0.88	-1.4
3,039,769	+				-1.8
3,039,769	+				+0.4
3,039,777	-				-1.2
3,039,777	-				-0.9
3,039,777	-				-0.1
3,039,777	-				+0.4
3,039,784	+				-1.4
3,039,784	-				+0.8
3,039,794	+				+0.4
3,039,893	+				-0.5
3,039,971	-				-0.5
3,039,974	+				+0.2
3,039,974	+				+0.2
3,039,974	+				+0.7
3,039,995	+				-0.2
3,039,998	-				-0.5
3,040,005	+				+0.9
3,040,030	-				-1.4
3,040,187	+		CCNA_02892	0.55	-2.0
3,040,257	+		CCNA_02892	0.78	-0.5
3,040,265	-		CCNA_02892	0.81	+1.2
3,040,269	+		CCNA_02892	0.82	-0.2
3,040,299	+				-0.4
3,040,343	+				-1.0
3,040,343	+				-1.7
3,040,347	+				-1.4
3,040,353	-				+0.5
3,040,353	-				-1.8
3,040,383	+				+0.7
3,040,391	-				+0.5
3,040,391	-				-0.3
3,040,410	+				+1.5
3,040,410	+				+1.2
3,040,410	+				+1.1
3,040,437	+				+0.4
3,040,445	-				+0.2
3,040,454	+				-1.0
3,040,476	+				+0.6
3,040,476	-				+1.0
3,040,496	-				+0.4
3,040,513	+				-0.3
3,040,513	+				-0.9
3,040,513	+				-0.4
3,040,513	+				-0.3
3,040,513	+				-2.6
3,040,513	+				-0.5
3,040,521	-				+0.4
3,040,521	-				+0.4
3,040,521	-				+1.8
3,040,521	-				+0.6
3,040,521	-				-0.3
3,040,521	-				-0.1
3,040,557	+		CCNA_02893	0.11	-1.1
3,040,557	+		CCNA_02893	0.11	-0.4
3,040,565	-		CCNA_02893	0.11	+0.2
3,040,654	-		CCNA_02893	0.16	-1.1
3,040,705	+		CCNA_02893	0.19	+0.4
3,040,730	+		CCNA_02893	0.21	-2.1
3,040,835	-		CCNA_02893	0.27	-2.1
3,040,844	-		CCNA_02893	0.28	-0.2
3,040,855	+		CCNA_02893	0.28	+0.1
3,040,863	+		CCNA_02893	0.29	+2.5
3,040,863	-		CCNA_02893	0.29	-1.5
3,040,940	+		CCNA_02893	0.33	-0.9
3,040,940	+		CCNA_02893	0.33	-2.1
3,040,950	+		CCNA_02893	0.34	-0.5