Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02627 and CCNA_02628 are separated by 218 nucleotides CCNA_02628 and CCNA_02629 are separated by 151 nucleotides
CCNA_02627: CCNA_02627 - aminopeptidase, at 2,776,907 to 2,778,310
_02627
CCNA_02628: CCNA_02628 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 2,778,529 to 2,779,434
_02628
CCNA_02629: CCNA_02629 - UDP-N-acetylmuramate--alanine ligase, at 2,779,586 to 2,781,007
_02629
Position (kb)
2778
2779
2780 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2777.553 kb on + strand, within CCNA_02627 at 2777.571 kb on - strand, within CCNA_02627 at 2777.581 kb on + strand, within CCNA_02627 at 2777.582 kb on - strand, within CCNA_02627 at 2777.605 kb on - strand, within CCNA_02627 at 2777.630 kb on - strand, within CCNA_02627 at 2777.640 kb on - strand, within CCNA_02627 at 2777.669 kb on + strand, within CCNA_02627 at 2777.672 kb on + strand, within CCNA_02627 at 2777.697 kb on + strand, within CCNA_02627 at 2777.705 kb on + strand, within CCNA_02627 at 2777.741 kb on + strand, within CCNA_02627 at 2777.749 kb on - strand, within CCNA_02627 at 2777.810 kb on + strand, within CCNA_02627 at 2777.839 kb on + strand, within CCNA_02627 at 2777.853 kb on - strand, within CCNA_02627 at 2777.862 kb on + strand, within CCNA_02627 at 2777.862 kb on + strand, within CCNA_02627 at 2777.892 kb on + strand, within CCNA_02627 at 2777.892 kb on + strand, within CCNA_02627 at 2777.910 kb on + strand, within CCNA_02627 at 2777.910 kb on + strand, within CCNA_02627 at 2777.910 kb on + strand, within CCNA_02627 at 2777.910 kb on + strand, within CCNA_02627 at 2777.918 kb on - strand, within CCNA_02627 at 2777.918 kb on - strand, within CCNA_02627 at 2777.918 kb on - strand, within CCNA_02627 at 2777.918 kb on - strand, within CCNA_02627 at 2777.918 kb on - strand, within CCNA_02627 at 2777.918 kb on - strand, within CCNA_02627 at 2777.918 kb on - strand, within CCNA_02627 at 2777.918 kb on - strand, within CCNA_02627 at 2777.933 kb on - strand, within CCNA_02627 at 2777.966 kb on + strand, within CCNA_02627 at 2777.974 kb on - strand, within CCNA_02627 at 2777.974 kb on - strand, within CCNA_02627 at 2777.994 kb on - strand, within CCNA_02627 at 2778.008 kb on - strand, within CCNA_02627 at 2778.039 kb on - strand, within CCNA_02627 at 2778.040 kb on - strand, within CCNA_02627 at 2778.042 kb on + strand, within CCNA_02627 at 2778.060 kb on + strand, within CCNA_02627 at 2778.060 kb on + strand, within CCNA_02627 at 2778.068 kb on - strand, within CCNA_02627 at 2778.068 kb on - strand, within CCNA_02627 at 2778.068 kb on - strand, within CCNA_02627 at 2778.077 kb on + strand, within CCNA_02627 at 2778.084 kb on + strand, within CCNA_02627 at 2778.084 kb on + strand, within CCNA_02627 at 2778.084 kb on + strand, within CCNA_02627 at 2778.084 kb on + strand, within CCNA_02627 at 2778.084 kb on + strand, within CCNA_02627 at 2778.092 kb on - strand, within CCNA_02627 at 2778.092 kb on - strand, within CCNA_02627 at 2778.100 kb on - strand, within CCNA_02627 at 2778.102 kb on + strand, within CCNA_02627 at 2778.107 kb on + strand, within CCNA_02627 at 2778.107 kb on + strand, within CCNA_02627 at 2778.114 kb on + strand, within CCNA_02627 at 2778.114 kb on + strand, within CCNA_02627 at 2778.115 kb on - strand, within CCNA_02627 at 2778.122 kb on - strand, within CCNA_02627 at 2778.122 kb on - strand, within CCNA_02627 at 2778.204 kb on + strand at 2778.212 kb on - strand at 2778.228 kb on + strand at 2778.228 kb on + strand at 2778.235 kb on + strand at 2778.236 kb on + strand at 2778.236 kb on - strand at 2778.244 kb on - strand at 2778.259 kb on + strand at 2778.305 kb on + strand at 2778.326 kb on - strand at 2778.403 kb on + strand at 2778.403 kb on + strand at 2778.403 kb on + strand at 2778.406 kb on + strand at 2778.411 kb on - strand at 2778.411 kb on - strand at 2778.430 kb on - strand at 2778.440 kb on - strand at 2778.498 kb on + strand at 2778.500 kb on + strand at 2778.506 kb on - strand at 2778.513 kb on + strand at 2778.518 kb on + strand at 2778.532 kb on - strand at 2778.534 kb on + strand at 2778.534 kb on - strand at 2779.409 kb on + strand at 2779.468 kb on + strand at 2779.497 kb on - strand at 2779.497 kb on - strand at 2779.499 kb on + strand at 2779.552 kb on - strand at 2779.566 kb on + strand at 2779.592 kb on + strand at 2779.599 kb on + strand at 2779.607 kb on - strand at 2779.607 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 2,777,553 + CCNA_02627 0.46 -0.6 2,777,571 - CCNA_02627 0.47 +1.1 2,777,581 + CCNA_02627 0.48 -1.3 2,777,582 - CCNA_02627 0.48 -0.6 2,777,605 - CCNA_02627 0.50 +1.4 2,777,630 - CCNA_02627 0.51 +0.5 2,777,640 - CCNA_02627 0.52 +1.3 2,777,669 + CCNA_02627 0.54 -1.3 2,777,672 + CCNA_02627 0.54 -0.6 2,777,697 + CCNA_02627 0.56 -1.0 2,777,705 + CCNA_02627 0.57 -0.1 2,777,741 + CCNA_02627 0.59 -2.4 2,777,749 - CCNA_02627 0.60 -1.1 2,777,810 + CCNA_02627 0.64 -0.4 2,777,839 + CCNA_02627 0.66 -0.6 2,777,853 - CCNA_02627 0.67 -0.3 2,777,862 + CCNA_02627 0.68 -1.0 2,777,862 + CCNA_02627 0.68 -1.0 2,777,892 + CCNA_02627 0.70 -2.1 2,777,892 + CCNA_02627 0.70 -0.5 2,777,910 + CCNA_02627 0.71 +0.1 2,777,910 + CCNA_02627 0.71 -0.0 2,777,910 + CCNA_02627 0.71 +0.4 2,777,910 + CCNA_02627 0.71 -2.6 2,777,918 - CCNA_02627 0.72 +0.7 2,777,918 - CCNA_02627 0.72 -0.3 2,777,918 - CCNA_02627 0.72 -0.4 2,777,918 - CCNA_02627 0.72 -0.5 2,777,918 - CCNA_02627 0.72 -0.4 2,777,918 - CCNA_02627 0.72 +1.1 2,777,918 - CCNA_02627 0.72 -0.0 2,777,918 - CCNA_02627 0.72 -0.2 2,777,933 - CCNA_02627 0.73 +1.4 2,777,966 + CCNA_02627 0.75 +0.2 2,777,974 - CCNA_02627 0.76 -0.5 2,777,974 - CCNA_02627 0.76 -0.1 2,777,994 - CCNA_02627 0.77 +0.9 2,778,008 - CCNA_02627 0.78 +0.9 2,778,039 - CCNA_02627 0.81 -1.1 2,778,040 - CCNA_02627 0.81 +0.0 2,778,042 + CCNA_02627 0.81 -1.1 2,778,060 + CCNA_02627 0.82 -1.0 2,778,060 + CCNA_02627 0.82 -2.9 2,778,068 - CCNA_02627 0.83 -0.1 2,778,068 - CCNA_02627 0.83 +0.8 2,778,068 - CCNA_02627 0.83 +0.2 2,778,077 + CCNA_02627 0.83 +0.6 2,778,084 + CCNA_02627 0.84 -1.2 2,778,084 + CCNA_02627 0.84 -0.1 2,778,084 + CCNA_02627 0.84 -1.5 2,778,084 + CCNA_02627 0.84 -2.3 2,778,084 + CCNA_02627 0.84 +3.2 2,778,092 - CCNA_02627 0.84 -1.9 2,778,092 - CCNA_02627 0.84 +0.3 2,778,100 - CCNA_02627 0.85 +1.6 2,778,102 + CCNA_02627 0.85 -0.6 2,778,107 + CCNA_02627 0.85 +0.9 2,778,107 + CCNA_02627 0.85 -1.1 2,778,114 + CCNA_02627 0.86 -0.7 2,778,114 + CCNA_02627 0.86 -1.7 2,778,115 - CCNA_02627 0.86 +1.6 2,778,122 - CCNA_02627 0.87 +0.2 2,778,122 - CCNA_02627 0.87 -0.7 2,778,204 + -0.1 2,778,212 - +0.1 2,778,228 + -1.8 2,778,228 + -2.4 2,778,235 + +0.6 2,778,236 + -0.0 2,778,236 - +1.1 2,778,244 - +0.4 2,778,259 + -0.6 2,778,305 + -1.7 2,778,326 - -0.5 2,778,403 + -0.7 2,778,403 + -0.6 2,778,403 + -0.4 2,778,406 + +0.4 2,778,411 - +1.2 2,778,411 - +2.0 2,778,430 - +1.5 2,778,440 - +0.4 2,778,498 + -0.7 2,778,500 + -0.0 2,778,506 - +2.0 2,778,513 + -0.7 2,778,518 + -1.3 2,778,532 - +1.5 2,778,534 + -0.6 2,778,534 - +3.1 2,779,409 + +1.4 2,779,468 + +0.6 2,779,497 - +0.6 2,779,497 - +1.5 2,779,499 + -0.4 2,779,552 - +1.0 2,779,566 + -0.5 2,779,592 + +0.0 2,779,599 + -0.6 2,779,607 - +2.0 2,779,607 - +2.0
Or see this region's nucleotide sequence