Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01648

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
1,767,410	+		CCNA_01647	0.20	-0.5
1,767,418	-		CCNA_01647	0.21	+0.0
1,767,418	-		CCNA_01647	0.21	-1.4
1,767,418	-		CCNA_01647	0.21	-1.1
1,767,436	+		CCNA_01647	0.22	-1.4
1,767,519	+		CCNA_01647	0.29	-0.8
1,767,521	-		CCNA_01647	0.30	-1.7
1,767,521	-		CCNA_01647	0.30	-0.5
1,767,586	-		CCNA_01647	0.35	-0.2
1,767,617	-		CCNA_01647	0.38	+0.6
1,767,663	-		CCNA_01647	0.42	-1.6
1,767,663	-		CCNA_01647	0.42	-0.5
1,767,682	-		CCNA_01647	0.43	+1.8
1,767,909	-		CCNA_01647	0.63	+0.1
1,767,936	+		CCNA_01647	0.65	-0.7
1,767,943	-		CCNA_01647	0.66	-1.3
1,767,977	+		CCNA_01647	0.69	-1.4
1,768,007	+		CCNA_01647	0.72	-1.9
1,768,047	-		CCNA_01647	0.75	-0.9
1,768,128	+		CCNA_01647	0.82	-1.1
1,768,136	-		CCNA_01647	0.83	-0.1
1,768,153	+		CCNA_01647	0.84	-3.0
1,768,178	+		CCNA_01647	0.86	-2.3
1,768,263	-				-0.5
1,768,271	+				-1.3
1,768,278	+				+0.3
1,768,327	-				+1.0
1,768,407	+				-0.2
1,768,421	+				-0.9
1,768,421	+				-0.0
1,768,438	+				-2.3
1,768,446	-				-2.1
1,768,513	+				+0.1
1,768,516	-				-0.9
1,768,521	-				-0.8
1,768,532	+		CCNA_01648	0.10	+1.3
1,768,535	-		CCNA_01648	0.10	+0.2
1,768,540	-				+2.8
1,768,540	-		CCNA_01648	0.11	+0.5
1,768,542	+		CCNA_01648	0.11	-1.2
1,768,584	+		CCNA_01648	0.14	-1.3
1,768,620	+		CCNA_01648	0.17	-0.9
1,768,620	+		CCNA_01648	0.17	-0.9
1,768,620	+		CCNA_01648	0.17	+0.5
1,768,628	-		CCNA_01648	0.18	-1.2
1,768,628	-		CCNA_01648	0.18	-0.2
1,768,628	-		CCNA_01648	0.18	+0.2
1,768,651	+		CCNA_01648	0.19	-1.4
1,768,660	-		CCNA_01648	0.20	-1.0
1,768,663	+		CCNA_01648	0.20	+1.5
1,768,711	+		CCNA_01648	0.24	-1.2
1,768,712	+		CCNA_01648	0.24	-1.4
1,768,719	-		CCNA_01648	0.25	-1.9
1,768,719	-		CCNA_01648	0.25	-1.7
1,768,808	+		CCNA_01648	0.32	+1.8
1,768,808	+		CCNA_01648	0.32	-0.0
1,768,808	+		CCNA_01648	0.32	-1.3
1,768,818	+		CCNA_01648	0.33	-3.0
1,768,826	-		CCNA_01648	0.33	-1.7
1,768,845	+		CCNA_01648	0.35	-0.5
1,768,934	-		CCNA_01648	0.42	-1.5
1,768,983	-		CCNA_01648	0.46	-0.5
1,769,060	+		CCNA_01648	0.52	-0.7
1,769,068	-		CCNA_01648	0.52	-1.0
1,769,068	-		CCNA_01648	0.52	-1.6
1,769,070	+		CCNA_01648	0.53	-0.3
1,769,073	+		CCNA_01648	0.53	-1.5
1,769,079	-		CCNA_01648	0.53	+0.1
1,769,113	-		CCNA_01648	0.56	-1.7
1,769,195	+		CCNA_01648	0.63	-1.0
1,769,195	+		CCNA_01648	0.63	-3.1
1,769,195	+		CCNA_01648	0.63	-0.3
1,769,203	-		CCNA_01648	0.63	+0.8
1,769,203	-		CCNA_01648	0.63	+0.7
1,769,205	+		CCNA_01648	0.63	-0.2
1,769,205	+		CCNA_01648	0.63	-1.0
1,769,205	+		CCNA_01648	0.63	-0.4
1,769,205	+		CCNA_01648	0.63	-0.3
1,769,205	+		CCNA_01648	0.63	+0.9
1,769,205	+		CCNA_01648	0.63	-0.4
1,769,205	+		CCNA_01648	0.63	+0.0
1,769,213	-		CCNA_01648	0.64	-0.6
1,769,213	-		CCNA_01648	0.64	-2.4
1,769,213	-		CCNA_01648	0.64	-1.4
1,769,225	+		CCNA_01648	0.65	-1.2
1,769,265	+		CCNA_01648	0.68	-1.1
1,769,271	-		CCNA_01648	0.69	-2.8
1,769,274	+		CCNA_01648	0.69	-1.3
1,769,332	+		CCNA_01648	0.73	-0.5
1,769,360	+		CCNA_01648	0.76	+0.2
1,769,360	+		CCNA_01648	0.76	-2.2
1,769,370	+		CCNA_01648	0.76	-0.5
1,769,370	+		CCNA_01648	0.76	-0.8
1,769,370	+		CCNA_01648	0.76	+0.5
1,769,378	-		CCNA_01648	0.77	-1.5
1,769,429	+		CCNA_01648	0.81	-0.5
1,769,430	+		CCNA_01648	0.81	-1.9
1,769,430	+		CCNA_01648	0.81	+0.9
1,769,437	-		CCNA_01648	0.82	-1.2
1,769,437	-		CCNA_01648	0.82	-1.8
1,769,437	-		CCNA_01648	0.82	+0.5
1,769,444	-		CCNA_01648	0.82	-0.4
1,769,463	-		CCNA_01648	0.84	-0.2
1,769,474	+		CCNA_01648	0.85	-0.4
1,769,519	+		CCNA_01648	0.88	-1.7
1,769,578	+				-3.4
1,769,639	-				-1.0
1,769,649	+				-1.3
1,769,657	-				-1.2
1,769,675	+				+1.2
1,769,688	-				-2.6
1,769,689	-				-0.5
1,769,693	-				-0.9
1,769,720	+				+0.1
1,769,727	+				+0.4
1,769,727	+				-3.0
1,769,735	-				-1.7
1,769,764	-		CCNA_01649	0.11	-1.5
1,769,765	-		CCNA_01649	0.11	-2.1
1,769,774	+		CCNA_01649	0.12	-1.2
1,769,852	+		CCNA_01649	0.20	+1.9
1,769,916	+		CCNA_01649	0.27	+0.1
1,769,924	-		CCNA_01649	0.28	+0.8
1,769,945	+		CCNA_01649	0.30	-2.8
1,769,950	+		CCNA_01649	0.30	+1.9
1,769,953	-		CCNA_01649	0.31	-0.5
1,769,953	-		CCNA_01649	0.31	+0.3
1,769,953	-		CCNA_01649	0.31	-0.8
1,769,962	+		CCNA_01649	0.32	+1.2
1,769,962	+		CCNA_01649	0.32	-0.7
1,769,970	-		CCNA_01649	0.32	-1.1
1,769,980	+		CCNA_01649	0.34	-0.3
1,769,988	-		CCNA_01649	0.34	+0.2
1,769,988	-		CCNA_01649	0.34	+0.5
1,770,003	+		CCNA_01649	0.36	-1.9
1,770,010	-		CCNA_01649	0.37	+0.2
1,770,031	+		CCNA_01649	0.39	+0.6
1,770,031	+		CCNA_01649	0.39	+0.6
1,770,039	-		CCNA_01649	0.40	-1.4
1,770,069	+		CCNA_01649	0.43	+1.9
1,770,074	+		CCNA_01649	0.44	+0.1
1,770,092	+		CCNA_01649	0.45	+0.2
1,770,112	+		CCNA_01649	0.48	-1.0
1,770,119	+		CCNA_01649	0.48	+0.8
1,770,125	+		CCNA_01649	0.49	+2.8
1,770,153	-		CCNA_01649	0.52	-1.9
1,770,158	-		CCNA_01649	0.52	-1.5
1,770,159	+		CCNA_01649	0.53	-1.8
1,770,200	-		CCNA_01649	0.57	-0.4
1,770,202	+		CCNA_01649	0.57	+0.1
1,770,210	-		CCNA_01649	0.58	-2.7
1,770,230	-		CCNA_01649	0.60	-1.4
1,770,311	+		CCNA_01649	0.69	-0.5
1,770,311	+		CCNA_01649	0.69	+1.5
1,770,311	+				+1.2
1,770,311	+		CCNA_01649	0.69	+0.1
1,770,319	-		CCNA_01649	0.70	-1.5
1,770,327	+		CCNA_01649	0.70	+1.3
1,770,362	+		CCNA_01649	0.74	+1.3
1,770,392	+		CCNA_01649	0.77	+0.9
1,770,392	+		CCNA_01649	0.77	+0.9
1,770,400	-		CCNA_01649	0.78	+1.2
1,770,400	-		CCNA_01649	0.78	+0.6
1,770,400	-		CCNA_01649	0.78	-0.8
1,770,410	-		CCNA_01649	0.79	-1.4
1,770,424	+		CCNA_01649	0.81	+1.5
1,770,432	-		CCNA_01649	0.82	-1.5
1,770,436	+		CCNA_01649	0.82	+1.5
1,770,443	+		CCNA_01649	0.83	+0.5
1,770,450	+		CCNA_01649	0.83	+1.8
1,770,450	+		CCNA_01649	0.83	+0.8
1,770,458	-		CCNA_01649	0.84	-1.7
1,770,468	-		CCNA_01649	0.85	-2.9
1,770,515	-				-1.1
1,770,515	-				-1.2
1,770,520	-				-0.6
1,770,600	+				+1.4
1,770,608	-				-0.3
1,770,608	-				-2.4
1,770,627	+				+1.3