Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01353

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
1,464,853	+		CCNA_01352	0.55	+1.0
1,464,861	-		CCNA_01352	0.55	+1.2
1,464,861	-		CCNA_01352	0.55	+0.2
1,464,863	+		CCNA_01352	0.56	+0.1
1,464,863	+		CCNA_01352	0.56	-0.7
1,464,875	+		CCNA_01352	0.56	-0.9
1,464,877	+		CCNA_01352	0.56	-1.4
1,464,887	+		CCNA_01352	0.57	-0.5
1,464,955	+		CCNA_01352	0.61	-1.2
1,464,963	-		CCNA_01352	0.62	+0.5
1,464,963	-		CCNA_01352	0.62	+0.1
1,464,980	+		CCNA_01352	0.63	-1.1
1,464,980	+		CCNA_01352	0.63	-1.2
1,464,980	+		CCNA_01352	0.63	-2.2
1,464,988	-		CCNA_01352	0.63	+2.0
1,464,997	+		CCNA_01352	0.64	-0.3
1,465,010	-		CCNA_01352	0.65	+0.5
1,465,058	-		CCNA_01352	0.67	+0.7
1,465,130	-		CCNA_01352	0.72	+1.9
1,465,139	+		CCNA_01352	0.72	-1.4
1,465,139	+		CCNA_01352	0.72	-0.4
1,465,147	-		CCNA_01352	0.73	+1.2
1,465,147	-		CCNA_01352	0.73	+2.9
1,465,182	+		CCNA_01352	0.75	-2.8
1,465,228	+		CCNA_01352	0.78	+0.3
1,465,254	-		CCNA_01352	0.79	+0.9
1,465,292	+		CCNA_01352	0.82	-0.8
1,465,325	-		CCNA_01352	0.84	+1.3
1,465,341	+		CCNA_01352	0.85	+0.3
1,465,341	+		CCNA_01352	0.85	-1.0
1,465,349	-		CCNA_01352	0.85	+1.3
1,465,349	-		CCNA_01352	0.85	+0.5
1,465,349	-		CCNA_01352	0.85	+0.2
1,465,370	-		CCNA_01352	0.87	+1.2
1,465,438	-				+0.4
1,465,511	+				-0.8
1,465,518	-				+1.3
1,465,577	-				+0.6
1,465,604	+				-2.2
1,465,612	-				+1.5
1,465,622	+				-3.3
1,465,652	+				-1.0
1,465,691	+				+0.0
1,465,691	+				-1.4
1,465,699	-				-0.1
1,465,721	+				-1.2
1,465,737	+				-2.9
1,465,737	+				+0.3
1,465,739	+				-2.3
1,465,739	+				-0.7
1,465,739	+				+3.6
1,465,739	+				-1.5
1,465,739	+				-0.4
1,465,747	-				+0.2
1,465,747	-				+1.5
1,465,747	-				+0.4
1,465,757	+				-1.3
1,465,801	-				-0.2
1,465,801	-				-1.6
1,465,823	-				-2.3
1,465,834	+				-2.6
1,465,879	+				-2.8
1,465,879	+				-1.6
1,465,887	-				-0.2
1,465,887	-				-0.6
1,465,887	-				-0.0
1,465,887	-				-1.2
1,465,889	+				-0.6
1,465,889	+				-0.5
1,465,889	+				+0.3
1,465,912	-				-1.7
1,465,961	+				+0.9
1,465,961	+				-1.6
1,465,961	+				-0.7
1,465,969	-				-1.1
1,465,969	-				-0.1
1,465,969	-				-2.3
1,466,001	-				-1.7
1,466,001	-				-0.7
1,466,050	+				-1.8
1,466,065	+		CCNA_01353	0.10	-0.9
1,466,072	-		CCNA_01353	0.11	+0.9
1,466,080	-		CCNA_01353	0.11	+0.6
1,466,097	+		CCNA_01353	0.12	-0.5
1,466,103	-		CCNA_01353	0.12	-1.4
1,466,106	+		CCNA_01353	0.12	-1.3
1,466,116	+		CCNA_01353	0.13	-1.2
1,466,124	-		CCNA_01353	0.13	-0.1
1,466,124	-		CCNA_01353	0.13	+0.4
1,466,152	+		CCNA_01353	0.15	+0.2
1,466,188	+		CCNA_01353	0.17	+2.5
1,466,188	+		CCNA_01353	0.17	+1.6
1,466,196	-		CCNA_01353	0.17	-1.6
1,466,237	-		CCNA_01353	0.19	-2.5
1,466,247	+		CCNA_01353	0.19	+0.4
1,466,261	-		CCNA_01353	0.20	-1.7
1,466,280	+		CCNA_01353	0.21	+0.0
1,466,288	-		CCNA_01353	0.21	+0.2
1,466,339	-		CCNA_01353	0.24	+0.1
1,466,355	+		CCNA_01353	0.25	-2.8
1,466,356	+		CCNA_01353	0.25	+0.1
1,466,361	+		CCNA_01353	0.25	+1.6
1,466,361	+		CCNA_01353	0.25	-2.5
1,466,363	-		CCNA_01353	0.25	-1.4
1,466,364	-		CCNA_01353	0.25	+2.6
1,466,368	+		CCNA_01353	0.25	-1.0
1,466,378	+		CCNA_01353	0.26	-2.6
1,466,399	-		CCNA_01353	0.27	+0.0
1,466,399	-		CCNA_01353	0.27	-0.4
1,466,405	+		CCNA_01353	0.27	+0.1
1,466,470	+		CCNA_01353	0.30	+0.7
1,466,470	+		CCNA_01353	0.30	-2.7
1,466,472	+		CCNA_01353	0.31	-0.7
1,466,478	-		CCNA_01353	0.31	-1.5
1,466,479	+		CCNA_01353	0.31	-0.3
1,466,480	-		CCNA_01353	0.31	-0.6
1,466,480	-		CCNA_01353	0.31	-1.0
1,466,487	-		CCNA_01353	0.31	+0.3
1,466,497	+		CCNA_01353	0.32	+0.1
1,466,497	+		CCNA_01353	0.32	-0.2
1,466,503	-		CCNA_01353	0.32	-0.7
1,466,503	-		CCNA_01353	0.32	-1.3
1,466,505	-		CCNA_01353	0.32	-1.1
1,466,519	+		CCNA_01353	0.33	-2.2
1,466,544	+		CCNA_01353	0.34	-1.0
1,466,544	+		CCNA_01353	0.34	+1.1
1,466,622	-		CCNA_01353	0.38	+0.3
1,466,648	-		CCNA_01353	0.39	+0.0
1,466,686	+		CCNA_01353	0.41	+0.6
1,466,686	+		CCNA_01353	0.41	-0.2
1,466,688	+		CCNA_01353	0.41	+0.9
1,466,781	-		CCNA_01353	0.46	-0.0
1,466,811	-		CCNA_01353	0.47	-0.4
1,466,820	+		CCNA_01353	0.48	-1.3
1,466,820	+				+1.6
1,466,828	-		CCNA_01353	0.48	+0.8
1,466,828	-		CCNA_01353	0.48	-1.6
1,466,830	+		CCNA_01353	0.48	+0.4
1,466,835	+		CCNA_01353	0.48	+1.7
1,466,849	+		CCNA_01353	0.49	-0.5
1,466,869	-		CCNA_01353	0.50	+0.3
1,466,872	+				+0.3
1,466,901	+		CCNA_01353	0.52	-1.2
1,466,906	+		CCNA_01353	0.52	+2.1
1,466,909	-		CCNA_01353	0.52	+0.8
1,466,909	-		CCNA_01353	0.52	+1.1
1,466,914	-		CCNA_01353	0.52	-0.6
1,466,914	-		CCNA_01353	0.52	-1.9
1,466,914	-		CCNA_01353	0.52	+0.9
1,467,014	+		CCNA_01353	0.57	-0.6
1,467,014	+		CCNA_01353	0.57	-1.6
1,467,147	+		CCNA_01353	0.64	+2.2
1,467,158	+				+0.3
1,467,191	-		CCNA_01353	0.66	+2.2
1,467,195	+		CCNA_01353	0.66	-0.9
1,467,195	+		CCNA_01353	0.66	-1.2
1,467,203	-		CCNA_01353	0.67	+2.2
1,467,284	-		CCNA_01353	0.71	+0.4
1,467,334	-		CCNA_01353	0.73	+0.2
1,467,351	+		CCNA_01353	0.74	+0.8
1,467,354	-		CCNA_01353	0.74	+1.8
1,467,378	+				+0.0
1,467,386	-		CCNA_01353	0.76	-1.3
1,467,425	+		CCNA_01353	0.78	+1.3
1,467,425	+		CCNA_01353	0.78	-1.9
1,467,425	+		CCNA_01353	0.78	-1.7
1,467,425	+		CCNA_01353	0.78	-2.8
1,467,425	+		CCNA_01353	0.78	+1.0
1,467,426	-		CCNA_01353	0.78	+0.1
1,467,433	-		CCNA_01353	0.78	+1.6
1,467,433	-		CCNA_01353	0.78	+0.9
1,467,433	-		CCNA_01353	0.78	-0.4
1,467,433	-		CCNA_01353	0.78	-2.3
1,467,433	-		CCNA_01353	0.78	+0.7
1,467,434	-		CCNA_01353	0.78	+1.4
1,467,528	+		CCNA_01353	0.83	-1.3
1,467,555	+		CCNA_01353	0.84	-2.1
1,467,601	+		CCNA_01353	0.86	+1.1
1,467,609	-		CCNA_01353	0.87	+1.2
1,467,618	+		CCNA_01353	0.87	-1.5
1,467,618	+		CCNA_01353	0.87	+0.3
1,467,626	-		CCNA_01353	0.87	-2.8
1,467,626	-		CCNA_01353	0.87	+0.5
1,467,631	-		CCNA_01353	0.88	+0.6
1,467,653	-		CCNA_01353	0.89	+0.5
1,467,732	-				+1.4
1,467,734	-				+2.0
1,467,752	+				-0.4
1,467,756	+				+0.3
1,467,769	-				+0.9
1,467,813	+				-0.6
1,467,821	-				-0.1
1,467,821	-				+1.3
1,467,842	-				+0.7
1,467,842	-				-0.4
1,467,993	-				-1.0
1,468,018	+				-1.7
1,468,018	+				-1.7
1,468,126	+				-0.6
1,468,127	-				+0.0
1,468,131	+				+0.0
1,468,134	-				+0.4
1,468,162	-				-1.2
1,468,175	-				+0.1
1,468,210	+				-1.0
1,468,210	+				-1.3
1,468,211	-				+0.1
1,468,218	-				+0.5
1,468,218	-				+0.6
1,468,247	+				+0.1
1,468,266	+				+1.3
1,468,274	-				+1.0
1,468,274	-				+1.5
1,468,274	-				+1.5
1,468,274	-				+0.1
1,468,302	+				+0.0
1,468,310	-				+0.5
1,468,310	-				-1.3
1,468,358	-		CCNA_01354	0.15	-1.8
1,468,364	-		CCNA_01354	0.15	+1.3
1,468,391	-		CCNA_01354	0.18	-0.7
1,468,425	-		CCNA_01354	0.22	-0.3
1,468,425	-		CCNA_01354	0.22	-0.4
1,468,437	+		CCNA_01354	0.23	+0.0
1,468,458	+		CCNA_01354	0.25	-0.4
1,468,465	+				+0.3
1,468,466	-		CCNA_01354	0.26	+1.3
1,468,466	-		CCNA_01354	0.26	-2.6
1,468,501	-		CCNA_01354	0.29	-0.9
1,468,529	-		CCNA_01354	0.32	-1.0
1,468,536	+		CCNA_01354	0.33	-2.4
1,468,544	-		CCNA_01354	0.34	-0.9
1,468,544	-		CCNA_01354	0.34	+0.0
1,468,544	-		CCNA_01354	0.34	+0.1
1,468,563	+		CCNA_01354	0.36	+0.6
1,468,565	-		CCNA_01354	0.36	-0.7
1,468,650	+		CCNA_01354	0.44	-0.2
1,468,658	-		CCNA_01354	0.45	-3.0
1,468,668	-		CCNA_01354	0.46	-1.1
1,468,670	+		CCNA_01354	0.46	-2.4
1,468,678	-		CCNA_01354	0.47	-2.1
1,468,715	+		CCNA_01354	0.51	-1.4
1,468,736	-		CCNA_01354	0.53	-1.3
1,468,776	-		CCNA_01354	0.57	-0.9
1,468,805	+		CCNA_01354	0.60	-1.2
1,468,813	-		CCNA_01354	0.61	-1.0
1,468,813	-		CCNA_01354	0.61	+1.3
1,468,813	-		CCNA_01354	0.61	-0.7