Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS24420 and CA265_RS24425 are separated by 195 nucleotides CA265_RS24425 and CA265_RS24430 are separated by 532 nucleotides
CA265_RS24420: CA265_RS24420 - SusD/RagB family nutrient-binding outer membrane lipoprotein, at 5,947,711 to 5,949,279
_RS24420
CA265_RS24425: CA265_RS24425 - tRNA-Asn, at 5,949,475 to 5,949,548
_RS24425
CA265_RS24430: CA265_RS24430 - hypothetical protein, at 5,950,081 to 5,950,698
_RS24430
Position (kb) 5949
5950 Strain fitness (log2 ratio) -1
0
1
2
3 at 5948.570 kb on - strand, within CA265_RS24420 at 5948.572 kb on - strand, within CA265_RS24420 at 5948.784 kb on + strand, within CA265_RS24420 at 5948.784 kb on + strand, within CA265_RS24420 at 5948.945 kb on - strand, within CA265_RS24420 at 5948.945 kb on - strand, within CA265_RS24420 at 5948.951 kb on + strand, within CA265_RS24420 at 5948.951 kb on + strand, within CA265_RS24420 at 5948.952 kb on - strand, within CA265_RS24420 at 5948.999 kb on - strand, within CA265_RS24420 at 5948.999 kb on - strand, within CA265_RS24420 at 5948.999 kb on - strand, within CA265_RS24420 at 5948.999 kb on - strand, within CA265_RS24420 at 5949.132 kb on + strand at 5949.174 kb on + strand at 5949.175 kb on - strand at 5949.178 kb on - strand at 5949.218 kb on + strand at 5949.278 kb on - strand at 5949.425 kb on + strand at 5949.442 kb on + strand at 5949.564 kb on - strand at 5949.564 kb on - strand at 5949.643 kb on - strand at 5949.749 kb on + strand at 5949.767 kb on + strand at 5949.783 kb on - strand at 5949.910 kb on - strand at 5950.019 kb on - strand at 5950.094 kb on + strand at 5950.097 kb on + strand at 5950.260 kb on - strand, within CA265_RS24430 at 5950.272 kb on + strand, within CA265_RS24430 at 5950.288 kb on - strand, within CA265_RS24430 at 5950.463 kb on + strand, within CA265_RS24430 at 5950.464 kb on - strand, within CA265_RS24430 at 5950.482 kb on + strand, within CA265_RS24430 at 5950.540 kb on + strand, within CA265_RS24430 at 5950.541 kb on - strand, within CA265_RS24430 at 5950.541 kb on - strand, within CA265_RS24430 at 5950.543 kb on - strand, within CA265_RS24430
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 5,948,570 - CA265_RS24420 0.55 +0.6 5,948,572 - CA265_RS24420 0.55 -0.0 5,948,784 + CA265_RS24420 0.68 +0.8 5,948,784 + CA265_RS24420 0.68 +0.0 5,948,945 - CA265_RS24420 0.79 -0.6 5,948,945 - CA265_RS24420 0.79 -0.1 5,948,951 + CA265_RS24420 0.79 -0.2 5,948,951 + CA265_RS24420 0.79 +3.0 5,948,952 - CA265_RS24420 0.79 +2.0 5,948,999 - CA265_RS24420 0.82 -1.2 5,948,999 - CA265_RS24420 0.82 -0.1 5,948,999 - CA265_RS24420 0.82 +0.5 5,948,999 - CA265_RS24420 0.82 -0.9 5,949,132 + +0.6 5,949,174 + +0.1 5,949,175 - -0.9 5,949,178 - -0.8 5,949,218 + +1.5 5,949,278 - +2.0 5,949,425 + +0.5 5,949,442 + -0.1 5,949,564 - +0.7 5,949,564 - +0.7 5,949,643 - +0.3 5,949,749 + +0.0 5,949,767 + +0.2 5,949,783 - +0.0 5,949,910 - +1.4 5,950,019 - -1.1 5,950,094 + -0.8 5,950,097 + -0.6 5,950,260 - CA265_RS24430 0.29 -1.0 5,950,272 + CA265_RS24430 0.31 -1.6 5,950,288 - CA265_RS24430 0.33 +1.2 5,950,463 + CA265_RS24430 0.62 +0.3 5,950,464 - CA265_RS24430 0.62 -1.3 5,950,482 + CA265_RS24430 0.65 +2.0 5,950,540 + CA265_RS24430 0.74 -0.1 5,950,541 - CA265_RS24430 0.74 -0.6 5,950,541 - CA265_RS24430 0.74 +0.0 5,950,543 - CA265_RS24430 0.75 -0.6
Or see this region's nucleotide sequence