Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12550

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
3,139,511	-		CA265_RS12545	0.66	-0.5
3,139,511	-		CA265_RS12545	0.66	-0.4
3,139,513	+		CA265_RS12545	0.66	-1.0
3,139,596	+		CA265_RS12545	0.70	-0.1
3,139,596	+		CA265_RS12545	0.70	-0.4
3,139,674	-		CA265_RS12545	0.74	-1.3
3,139,678	+		CA265_RS12545	0.74	-0.2
3,139,679	-		CA265_RS12545	0.74	-0.7
3,139,679	-		CA265_RS12545	0.74	+1.6
3,139,849	+		CA265_RS12545	0.81	-0.1
3,139,850	-		CA265_RS12545	0.81	+0.1
3,139,883	-		CA265_RS12545	0.83	+0.8
3,139,884	+		CA265_RS12545	0.83	-0.8
3,139,884	+		CA265_RS12545	0.83	-0.3
3,139,893	-		CA265_RS12545	0.83	+1.7
3,139,917	+		CA265_RS12545	0.84	+0.3
3,139,917	+		CA265_RS12545	0.84	-0.9
3,139,933	+		CA265_RS12545	0.85	-0.7
3,139,939	+		CA265_RS12545	0.85	+0.2
3,139,942	-		CA265_RS12545	0.86	+0.4
3,139,949	+		CA265_RS12545	0.86	-0.3
3,139,950	-		CA265_RS12545	0.86	+1.4
3,140,021	-		CA265_RS12545	0.89	+0.4
3,140,198	-				-0.0
3,140,222	-				-0.3
3,140,222	-				-0.8
3,140,227	+				-0.5
3,140,227	+				-0.9
3,140,227	+				+0.5
3,140,228	-				+0.0
3,140,230	+				-0.2
3,140,230	+				+0.3
3,140,231	-				+0.3
3,140,231	-				+0.3
3,140,232	+				+0.8
3,140,232	+				-0.3
3,140,319	+				+0.2
3,140,392	-				+1.3
3,140,400	+				+0.6
3,140,404	+				+0.4
3,140,405	-				-0.9
3,140,406	+				+0.3
3,140,406	+				+0.0
3,140,407	-				+0.1
3,140,411	+				-2.3
3,140,448	+				+0.1
3,140,453	+				+0.6
3,140,471	+				-0.5
3,140,471	+				-1.2
3,140,650	+		CA265_RS12550	0.20	+0.6
3,140,650	+		CA265_RS12550	0.20	+1.3
3,140,651	-		CA265_RS12550	0.21	+1.0
3,140,690	+		CA265_RS12550	0.26	-0.3
3,140,690	+		CA265_RS12550	0.26	+1.1
3,140,690	+		CA265_RS12550	0.26	-0.3
3,140,736	+		CA265_RS12550	0.32	-0.6
3,140,746	+		CA265_RS12550	0.34	+0.6
3,140,746	+		CA265_RS12550	0.34	+1.9
3,140,746	+		CA265_RS12550	0.34	+0.3
3,140,746	+		CA265_RS12550	0.34	+2.1
3,140,747	-		CA265_RS12550	0.34	-0.1
3,140,780	+		CA265_RS12550	0.38	+0.4
3,140,785	+		CA265_RS12550	0.39	-0.3
3,140,798	+		CA265_RS12550	0.41	+0.1
3,140,812	+		CA265_RS12550	0.43	+1.1
3,140,812	+		CA265_RS12550	0.43	+0.3
3,140,812	+		CA265_RS12550	0.43	-0.7
3,140,840	-		CA265_RS12550	0.47	+0.1
3,140,929	-		CA265_RS12550	0.59	-0.3
3,140,946	-		CA265_RS12550	0.61	-0.3
3,141,008	+		CA265_RS12550	0.70	+0.3
3,141,027	-		CA265_RS12550	0.73	-0.2
3,141,067	-		CA265_RS12550	0.78	+0.3
3,141,096	-		CA265_RS12550	0.82	-2.3
3,141,108	-		CA265_RS12550	0.84	-0.7
3,141,182	+				-1.2
3,141,187	+				-0.2
3,141,188	-				+0.9
3,141,188	-				+1.0
3,141,203	+				+0.5
3,141,204	-				-1.1
3,141,205	+				-0.0
3,141,206	-				+0.5
3,141,206	-				-1.0
3,141,207	+				-0.8
3,141,207	+				+0.6
3,141,208	-				-0.9
3,141,208	-				-0.2
3,141,265	+				+0.4
3,141,297	-				+0.0
3,141,374	+		CA265_RS12555	0.18	+0.0
3,141,374	+		CA265_RS12555	0.18	-0.3
3,141,387	+		CA265_RS12555	0.19	-1.1
3,141,429	+		CA265_RS12555	0.24	-0.2
3,141,476	-		CA265_RS12555	0.30	-0.3
3,141,525	+		CA265_RS12555	0.35	-0.3
3,141,526	-		CA265_RS12555	0.35	-0.0
3,141,546	+		CA265_RS12555	0.38	+1.3
3,141,547	-		CA265_RS12555	0.38	+1.2
3,141,547	-		CA265_RS12555	0.38	+1.5
3,141,602	-		CA265_RS12555	0.44	+0.7
3,141,602	-		CA265_RS12555	0.44	-0.3
3,141,622	+		CA265_RS12555	0.47	-0.6
3,141,623	-		CA265_RS12555	0.47	+0.2
3,141,787	-		CA265_RS12555	0.66	-0.9
3,141,804	-		CA265_RS12555	0.68	-0.8
3,141,844	-		CA265_RS12555	0.72	+0.1
3,141,848	+		CA265_RS12555	0.73	-0.1
3,141,880	+		CA265_RS12555	0.77	-0.2
3,141,962	-		CA265_RS12555	0.86	-0.8
3,141,972	+		CA265_RS12555	0.87	-0.5
3,141,975	+		CA265_RS12555	0.88	-0.8
3,142,001	-				-1.6
3,142,012	+				+0.0
3,142,013	-				-2.3
3,142,013	-				-0.2
3,142,104	+				-0.5
3,142,192	+		CA265_RS12560	0.17	-0.5