Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10920
Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,686,450 | + | CA265_RS10915 | 0.80 | +0.9 | |
2,686,594 | + | +1.0 | |||
2,686,596 | + | +0.9 | |||
2,686,597 | - | -0.1 | |||
2,686,817 | + | +0.1 | |||
2,686,818 | - | -0.1 | |||
2,686,835 | + | -0.4 | |||
2,686,840 | - | +0.6 | |||
2,686,973 | - | +0.6 | |||
2,687,093 | - | +0.3 | |||
2,687,093 | - | -0.0 | |||
2,687,205 | + | +1.1 | |||
2,687,205 | + | +0.2 | |||
2,687,207 | + | +0.6 | |||
2,687,208 | - | -0.3 | |||
2,687,229 | + | -0.3 | |||
2,687,283 | + | +0.6 | |||
2,687,284 | - | +0.1 | |||
2,687,285 | + | -0.9 | |||
2,687,295 | + | +0.6 | |||
2,687,297 | + | -0.7 | |||
2,687,312 | + | +0.8 | |||
2,687,392 | + | CA265_RS10920 | 0.14 | +1.6 | |
2,687,478 | + | CA265_RS10920 | 0.33 | +0.0 | |
2,687,493 | - | CA265_RS10920 | 0.36 | +0.3 | |
2,687,494 | + | CA265_RS10920 | 0.37 | -1.2 | |
2,687,573 | + | CA265_RS10920 | 0.54 | +0.6 | |
2,687,627 | - | CA265_RS10920 | 0.66 | +1.2 | |
2,687,730 | + | CA265_RS10920 | 0.89 | +0.6 | |
2,687,743 | - | +0.9 | |||
2,687,857 | + | +0.4 | |||
2,687,857 | + | -0.6 | |||
2,687,858 | - | -1.0 | |||
2,688,409 | - | CA265_RS10925 | 0.84 | +1.4 | |
2,688,548 | + | -0.4 | |||
2,688,610 | - | -0.1 |
Or see this region's nucleotide sequence