Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10275

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,533,163	+		CA265_RS10270	0.61	+0.1
2,533,385	+		CA265_RS10270	0.71	-0.3
2,533,389	+		CA265_RS10270	0.72	-0.3
2,533,511	+		CA265_RS10270	0.77	+0.6
2,533,511	+		CA265_RS10270	0.77	-0.9
2,533,512	-		CA265_RS10270	0.77	+0.3
2,533,512	-		CA265_RS10270	0.77	-0.8
2,533,512	-		CA265_RS10270	0.77	-1.2
2,533,539	-		CA265_RS10270	0.79	-0.0
2,533,544	+		CA265_RS10270	0.79	-0.2
2,533,545	-		CA265_RS10270	0.79	-1.1
2,533,563	+		CA265_RS10270	0.80	-0.3
2,533,563	+		CA265_RS10270	0.80	-0.7
2,533,563	+		CA265_RS10270	0.80	-0.4
2,533,651	-		CA265_RS10270	0.84	-0.1
2,533,665	-		CA265_RS10270	0.84	-0.9
2,533,676	+		CA265_RS10270	0.85	+0.2
2,533,676	+		CA265_RS10270	0.85	-0.2
2,533,677	-		CA265_RS10270	0.85	-0.2
2,533,709	+		CA265_RS10270	0.86	+0.5
2,533,769	+		CA265_RS10270	0.89	-1.1
2,533,770	-		CA265_RS10270	0.89	-0.5
2,533,794	-				-0.7
2,533,812	-				+0.7
2,533,834	+				-1.6
2,533,878	+				+0.3
2,533,952	+				-0.5
2,533,953	-				+0.2
2,533,967	+				-0.0
2,534,009	-				-0.6
2,534,069	+				-0.6
2,534,074	-				+1.6
2,534,077	-				+0.1
2,534,106	-				-1.0
2,534,199	+				-0.7
2,534,200	-				-0.5
2,534,200	-				-1.1
2,534,243	-				+1.8
2,534,263	+				-0.2
2,534,264	-				-0.6
2,534,269	+				-0.1
2,534,270	-				-0.6
2,534,274	-				-0.5
2,534,288	+				-1.7
2,534,330	-		CA265_RS10275	0.12	+0.2
2,534,498	-		CA265_RS10275	0.20	+0.1
2,534,546	-		CA265_RS10275	0.22	-0.2
2,534,546	-		CA265_RS10275	0.22	-0.2
2,534,547	+		CA265_RS10275	0.22	+1.4
2,534,597	-		CA265_RS10275	0.25	+0.4
2,534,597	-		CA265_RS10275	0.25	-0.0
2,534,598	+		CA265_RS10275	0.25	-2.4
2,534,598	+		CA265_RS10275	0.25	+0.2
2,534,599	-		CA265_RS10275	0.25	+1.1
2,534,599	-		CA265_RS10275	0.25	+0.9
2,534,599	-		CA265_RS10275	0.25	+0.9
2,534,651	+		CA265_RS10275	0.27	-0.7
2,534,651	+		CA265_RS10275	0.27	+0.5
2,534,652	-		CA265_RS10275	0.28	-0.4
2,534,656	-		CA265_RS10275	0.28	+0.7
2,534,670	-		CA265_RS10275	0.28	-0.5
2,534,743	+		CA265_RS10275	0.32	+0.1
2,534,810	+		CA265_RS10275	0.35	-2.3
2,534,810	+		CA265_RS10275	0.35	-1.3
2,534,824	+		CA265_RS10275	0.36	+0.3
2,534,904	-		CA265_RS10275	0.40	-0.2
2,534,904	-		CA265_RS10275	0.40	-0.9
2,534,921	+		CA265_RS10275	0.41	+0.3
2,534,922	-		CA265_RS10275	0.41	+0.0
2,534,923	+		CA265_RS10275	0.41	-0.8
2,534,924	-		CA265_RS10275	0.41	-0.3
2,535,036	+		CA265_RS10275	0.46	+0.6
2,535,151	+		CA265_RS10275	0.52	+1.1
2,535,151	+		CA265_RS10275	0.52	-1.2
2,535,152	-		CA265_RS10275	0.52	+0.1
2,535,153	+		CA265_RS10275	0.52	-0.0
2,535,404	+		CA265_RS10275	0.64	-0.4
2,535,404	+		CA265_RS10275	0.64	-0.4
2,535,405	-		CA265_RS10275	0.64	+0.1
2,535,408	+		CA265_RS10275	0.65	-1.3
2,535,467	+		CA265_RS10275	0.67	-0.5
2,535,467	+		CA265_RS10275	0.67	-0.5
2,535,468	-		CA265_RS10275	0.67	-0.6
2,535,468	-		CA265_RS10275	0.67	+0.2
2,535,469	+		CA265_RS10275	0.67	-0.8
2,535,469	+		CA265_RS10275	0.67	+1.2
2,535,469	+		CA265_RS10275	0.67	-0.4
2,535,470	-		CA265_RS10275	0.68	+0.1
2,535,470	-		CA265_RS10275	0.68	+1.0
2,535,470	-		CA265_RS10275	0.68	+0.8
2,535,470	-		CA265_RS10275	0.68	-0.1
2,535,631	-		CA265_RS10275	0.75	-0.9
2,535,638	-		CA265_RS10275	0.76	+0.5
2,535,643	+		CA265_RS10275	0.76	-0.6
2,535,812	-		CA265_RS10275	0.84	-1.3
2,535,850	+		CA265_RS10275	0.86	-1.2
2,535,870	-		CA265_RS10275	0.87	-0.4
2,535,891	+		CA265_RS10275	0.88	+0.8
2,535,896	-		CA265_RS10275	0.88	-0.3
2,536,106	-				+2.6
2,536,106	-				-0.0
2,536,191	+				+0.1
2,536,222	+				+0.1
2,536,236	-				-1.4
2,536,252	-				+1.2
2,536,340	+				-0.9
2,536,376	+		CA265_RS10280	0.10	-0.3
2,536,376	+		CA265_RS10280	0.10	+0.3
2,536,466	+		CA265_RS10280	0.14	+0.6
2,536,485	-		CA265_RS10280	0.15	+0.0
2,536,485	-		CA265_RS10280	0.15	+0.1
2,536,491	+		CA265_RS10280	0.15	-0.6
2,536,512	-		CA265_RS10280	0.16	-1.2
2,536,556	+		CA265_RS10280	0.18	+0.5
2,536,557	-		CA265_RS10280	0.18	-0.3
2,536,663	+		CA265_RS10280	0.23	-1.6
2,536,675	-		CA265_RS10280	0.23	-0.3
2,536,675	-		CA265_RS10280	0.23	-0.3
2,536,686	-		CA265_RS10280	0.23	-0.1
2,536,755	+		CA265_RS10280	0.26	-0.3
2,536,756	-		CA265_RS10280	0.26	-0.0
2,536,843	-		CA265_RS10280	0.30	-1.1
2,536,924	+		CA265_RS10280	0.34	-0.1
2,537,003	-		CA265_RS10280	0.37	-1.0