Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS00825 and CA265_RS00830 are separated by 13 nucleotides CA265_RS00830 and CA265_RS00835 are separated by 166 nucleotides CA265_RS00835 and CA265_RS00840 overlap by 4 nucleotides
CA265_RS00825: CA265_RS00825 - hypothetical protein, at 196,173 to 197,621
_RS00825
CA265_RS00830: CA265_RS00830 - hypothetical protein, at 197,635 to 198,066
_RS00830
CA265_RS00835: CA265_RS00835 - hypothetical protein, at 198,233 to 199,228
_RS00835
CA265_RS00840: CA265_RS00840 - hypothetical protein, at 199,225 to 200,304
_RS00840
Position (kb) 198
199
200 Strain fitness (log2 ratio) -2
-1
0
1
2 at 197.268 kb on - strand, within CA265_RS00825 at 197.269 kb on + strand, within CA265_RS00825 at 197.276 kb on - strand, within CA265_RS00825 at 197.295 kb on + strand at 197.378 kb on - strand, within CA265_RS00825 at 197.411 kb on - strand, within CA265_RS00825 at 197.519 kb on + strand at 197.536 kb on - strand at 197.536 kb on - strand at 197.537 kb on + strand at 197.549 kb on + strand at 197.550 kb on - strand at 197.661 kb on + strand at 197.672 kb on + strand at 197.672 kb on + strand at 197.673 kb on - strand at 197.705 kb on + strand, within CA265_RS00830 at 197.790 kb on + strand, within CA265_RS00830 at 197.795 kb on + strand, within CA265_RS00830 at 197.796 kb on - strand, within CA265_RS00830 at 197.889 kb on + strand, within CA265_RS00830 at 197.962 kb on - strand, within CA265_RS00830 at 197.996 kb on + strand, within CA265_RS00830 at 198.064 kb on + strand at 198.065 kb on - strand at 198.068 kb on + strand at 198.137 kb on + strand at 198.138 kb on - strand at 198.138 kb on - strand at 198.191 kb on - strand at 198.196 kb on - strand at 198.225 kb on + strand at 198.257 kb on + strand at 198.375 kb on - strand, within CA265_RS00835 at 198.375 kb on - strand, within CA265_RS00835 at 198.467 kb on + strand, within CA265_RS00835 at 198.472 kb on + strand, within CA265_RS00835 at 198.472 kb on + strand, within CA265_RS00835 at 198.546 kb on - strand, within CA265_RS00835 at 198.546 kb on - strand, within CA265_RS00835 at 198.583 kb on - strand, within CA265_RS00835 at 198.668 kb on - strand, within CA265_RS00835 at 198.710 kb on + strand, within CA265_RS00835 at 198.757 kb on + strand, within CA265_RS00835 at 198.757 kb on + strand, within CA265_RS00835 at 198.758 kb on - strand, within CA265_RS00835 at 198.760 kb on - strand, within CA265_RS00835 at 198.760 kb on - strand, within CA265_RS00835 at 198.760 kb on - strand, within CA265_RS00835 at 198.838 kb on - strand, within CA265_RS00835 at 198.838 kb on - strand at 198.860 kb on - strand, within CA265_RS00835 at 198.982 kb on + strand, within CA265_RS00835 at 199.002 kb on + strand, within CA265_RS00835 at 199.028 kb on + strand, within CA265_RS00835 at 199.049 kb on - strand, within CA265_RS00835 at 199.060 kb on + strand, within CA265_RS00835 at 199.061 kb on - strand, within CA265_RS00835 at 199.061 kb on - strand, within CA265_RS00835 at 199.063 kb on - strand, within CA265_RS00835 at 199.100 kb on - strand, within CA265_RS00835 at 199.117 kb on + strand, within CA265_RS00835 at 199.118 kb on - strand, within CA265_RS00835 at 199.118 kb on - strand, within CA265_RS00835 at 199.173 kb on - strand at 199.242 kb on + strand at 199.355 kb on + strand, within CA265_RS00840 at 199.355 kb on + strand, within CA265_RS00840 at 199.356 kb on - strand, within CA265_RS00840 at 199.357 kb on + strand, within CA265_RS00840 at 199.357 kb on + strand, within CA265_RS00840 at 199.387 kb on - strand, within CA265_RS00840 at 199.388 kb on + strand, within CA265_RS00840 at 199.389 kb on - strand, within CA265_RS00840 at 199.389 kb on - strand, within CA265_RS00840 at 199.416 kb on + strand, within CA265_RS00840 at 199.418 kb on + strand, within CA265_RS00840 at 199.419 kb on - strand, within CA265_RS00840 at 199.419 kb on - strand, within CA265_RS00840 at 199.444 kb on - strand, within CA265_RS00840 at 199.445 kb on + strand, within CA265_RS00840 at 199.467 kb on - strand, within CA265_RS00840 at 199.477 kb on + strand, within CA265_RS00840 at 199.477 kb on + strand, within CA265_RS00840 at 199.478 kb on - strand, within CA265_RS00840 at 199.479 kb on + strand, within CA265_RS00840 at 199.564 kb on + strand, within CA265_RS00840 at 199.565 kb on - strand, within CA265_RS00840 at 199.565 kb on - strand, within CA265_RS00840 at 199.580 kb on + strand, within CA265_RS00840 at 199.609 kb on + strand, within CA265_RS00840 at 199.611 kb on + strand, within CA265_RS00840 at 199.631 kb on + strand, within CA265_RS00840 at 199.651 kb on - strand, within CA265_RS00840 at 199.676 kb on + strand, within CA265_RS00840 at 199.677 kb on - strand, within CA265_RS00840 at 199.705 kb on - strand, within CA265_RS00840 at 199.773 kb on + strand, within CA265_RS00840 at 199.776 kb on + strand, within CA265_RS00840 at 199.777 kb on - strand, within CA265_RS00840 at 199.778 kb on + strand, within CA265_RS00840 at 199.778 kb on + strand, within CA265_RS00840 at 199.779 kb on - strand, within CA265_RS00840 at 199.875 kb on - strand, within CA265_RS00840 at 199.875 kb on - strand, within CA265_RS00840 at 199.913 kb on + strand, within CA265_RS00840 at 199.952 kb on + strand, within CA265_RS00840 at 199.952 kb on + strand, within CA265_RS00840 at 199.953 kb on - strand, within CA265_RS00840 at 199.953 kb on - strand, within CA265_RS00840 at 200.005 kb on + strand, within CA265_RS00840 at 200.019 kb on + strand, within CA265_RS00840 at 200.019 kb on + strand, within CA265_RS00840 at 200.047 kb on - strand, within CA265_RS00840 at 200.064 kb on + strand, within CA265_RS00840 at 200.179 kb on - strand, within CA265_RS00840 at 200.181 kb on - strand, within CA265_RS00840 at 200.181 kb on - strand, within CA265_RS00840 at 200.227 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 197,268 - CA265_RS00825 0.76 -0.8 197,269 + CA265_RS00825 0.76 +0.3 197,276 - CA265_RS00825 0.76 -0.5 197,295 + +0.5 197,378 - CA265_RS00825 0.83 -0.4 197,411 - CA265_RS00825 0.85 +0.4 197,519 + +0.3 197,536 - -0.8 197,536 - -0.8 197,537 + -0.2 197,549 + -0.3 197,550 - -0.3 197,661 + +0.0 197,672 + +0.1 197,672 + -1.0 197,673 - -1.7 197,705 + CA265_RS00830 0.16 +1.0 197,790 + CA265_RS00830 0.36 +0.7 197,795 + CA265_RS00830 0.37 +0.0 197,796 - CA265_RS00830 0.37 -0.1 197,889 + CA265_RS00830 0.59 +0.2 197,962 - CA265_RS00830 0.76 +0.8 197,996 + CA265_RS00830 0.84 +0.2 198,064 + +0.6 198,065 - +0.0 198,068 + +0.0 198,137 + -1.4 198,138 - -1.0 198,138 - +1.4 198,191 - -0.7 198,196 - -1.8 198,225 + +0.8 198,257 + +0.3 198,375 - CA265_RS00835 0.14 +1.1 198,375 - CA265_RS00835 0.14 +0.8 198,467 + CA265_RS00835 0.23 +0.3 198,472 + CA265_RS00835 0.24 +1.2 198,472 + CA265_RS00835 0.24 -1.5 198,546 - CA265_RS00835 0.31 +0.4 198,546 - CA265_RS00835 0.31 +0.6 198,583 - CA265_RS00835 0.35 +1.0 198,668 - CA265_RS00835 0.44 +0.7 198,710 + CA265_RS00835 0.48 +1.0 198,757 + CA265_RS00835 0.53 +0.1 198,757 + CA265_RS00835 0.53 -2.5 198,758 - CA265_RS00835 0.53 +1.5 198,760 - CA265_RS00835 0.53 +0.2 198,760 - CA265_RS00835 0.53 -0.9 198,760 - CA265_RS00835 0.53 +0.3 198,838 - CA265_RS00835 0.61 +0.7 198,838 - +1.5 198,860 - CA265_RS00835 0.63 +1.5 198,982 + CA265_RS00835 0.75 -1.0 199,002 + CA265_RS00835 0.77 +2.6 199,028 + CA265_RS00835 0.80 -0.9 199,049 - CA265_RS00835 0.82 +0.3 199,060 + CA265_RS00835 0.83 +0.8 199,061 - CA265_RS00835 0.83 +0.2 199,061 - CA265_RS00835 0.83 -0.2 199,063 - CA265_RS00835 0.83 +0.3 199,100 - CA265_RS00835 0.87 +0.2 199,117 + CA265_RS00835 0.89 +0.0 199,118 - CA265_RS00835 0.89 -2.6 199,118 - CA265_RS00835 0.89 +0.2 199,173 - -1.4 199,242 + -0.5 199,355 + CA265_RS00840 0.12 +0.2 199,355 + CA265_RS00840 0.12 -0.3 199,356 - CA265_RS00840 0.12 -0.2 199,357 + CA265_RS00840 0.12 -0.5 199,357 + CA265_RS00840 0.12 -0.5 199,387 - CA265_RS00840 0.15 -1.6 199,388 + CA265_RS00840 0.15 +1.0 199,389 - CA265_RS00840 0.15 +0.1 199,389 - CA265_RS00840 0.15 +0.0 199,416 + CA265_RS00840 0.18 -0.4 199,418 + CA265_RS00840 0.18 +0.0 199,419 - CA265_RS00840 0.18 -0.9 199,419 - CA265_RS00840 0.18 +0.8 199,444 - CA265_RS00840 0.20 +0.1 199,445 + CA265_RS00840 0.20 +0.7 199,467 - CA265_RS00840 0.22 -0.0 199,477 + CA265_RS00840 0.23 -1.0 199,477 + CA265_RS00840 0.23 +1.5 199,478 - CA265_RS00840 0.23 +0.7 199,479 + CA265_RS00840 0.24 -1.1 199,564 + CA265_RS00840 0.31 -0.9 199,565 - CA265_RS00840 0.31 -1.9 199,565 - CA265_RS00840 0.31 -1.4 199,580 + CA265_RS00840 0.33 +0.5 199,609 + CA265_RS00840 0.36 -0.1 199,611 + CA265_RS00840 0.36 +0.2 199,631 + CA265_RS00840 0.38 +0.1 199,651 - CA265_RS00840 0.39 -0.5 199,676 + CA265_RS00840 0.42 -0.0 199,677 - CA265_RS00840 0.42 +0.9 199,705 - CA265_RS00840 0.44 +0.0 199,773 + CA265_RS00840 0.51 -1.0 199,776 + CA265_RS00840 0.51 +0.2 199,777 - CA265_RS00840 0.51 -0.1 199,778 + CA265_RS00840 0.51 +0.8 199,778 + CA265_RS00840 0.51 -1.1 199,779 - CA265_RS00840 0.51 +0.6 199,875 - CA265_RS00840 0.60 +0.0 199,875 - CA265_RS00840 0.60 -0.3 199,913 + CA265_RS00840 0.64 -0.2 199,952 + CA265_RS00840 0.67 -0.4 199,952 + CA265_RS00840 0.67 -0.2 199,953 - CA265_RS00840 0.67 +0.9 199,953 - CA265_RS00840 0.67 -0.4 200,005 + CA265_RS00840 0.72 -1.2 200,019 + CA265_RS00840 0.74 -1.2 200,019 + CA265_RS00840 0.74 -0.2 200,047 - CA265_RS00840 0.76 +0.0 200,064 + CA265_RS00840 0.78 +0.2 200,179 - CA265_RS00840 0.88 +1.2 200,181 - CA265_RS00840 0.89 -0.7 200,181 - CA265_RS00840 0.89 +0.1 200,227 + -0.1
Or see this region's nucleotide sequence