Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12420

Experiment: D-Glucuronic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucuronic Acid (C)
2,688,444	-		ABIE51_RS12415	0.84	+0.5
2,688,482	-		ABIE51_RS12415	0.85	-0.5
2,688,571	-		ABIE51_RS12415	0.88	+0.9
2,688,571	-		ABIE51_RS12415	0.88	-1.5
2,688,597	+		ABIE51_RS12415	0.88	-0.3
2,688,680	+				-1.8
2,688,681	-				-0.2
2,688,681	-				+1.1
2,688,681	-				-0.0
2,688,707	+				-0.5
2,688,707	+				-0.2
2,688,707	+				+0.2
2,688,708	-				-2.0
2,688,708	-				+1.2
2,688,708	-				-0.5
2,688,711	+				+0.5
2,688,711	+				+0.1
2,688,712	-				-0.2
2,688,761	+				+0.4
2,688,761	+				+0.3
2,688,761	+				+0.6
2,688,762	-				-0.5
2,688,762	-				+2.0
2,688,762	-				+0.4
2,688,765	+				-0.1
2,688,765	+				-0.9
2,688,765	+				+0.2
2,688,765	+				-0.3
2,688,765	+				-0.4
2,688,766	-				+1.3
2,688,766	-				+0.3
2,688,766	-				+0.7
2,688,766	-				+1.2
2,688,766	-				+0.5
2,688,766	-				+0.6
2,688,766	-				-1.1
2,688,766	-				-0.4
2,688,778	-				+0.2
2,688,791	+				+0.2
2,688,792	-				-0.2
2,688,811	+				-0.6
2,688,812	-				-0.7
2,688,812	-				-0.0
2,688,942	-				+3.0
2,688,942	-				+1.8
2,688,971	+				+1.7
2,688,972	-				+0.6
2,688,972	-				+0.3
2,688,989	+				+1.5
2,688,989	+				+0.2
2,688,989	+				+1.4
2,688,989	+				+0.7
2,688,990	-				-0.2
2,688,990	-				+1.2
2,688,990	-				-2.8
2,688,994	+				-0.7
2,688,995	-				-1.1
2,688,995	-				-0.5
2,689,076	+				-1.8
2,689,076	+				+0.6
2,689,077	-				-2.0
2,689,077	-				+0.2
2,689,093	+				-0.2
2,689,093	+				+0.6
2,689,140	+				-0.4
2,689,140	+				-0.5
2,689,140	+				-0.6
2,689,141	-				-0.3
2,689,141	-				+1.7
2,689,283	+				+0.5
2,689,283	+				+0.1
2,689,283	+				-0.9
2,689,284	-				-0.0
2,689,284	-				-0.5
2,689,284	-				+0.9
2,689,284	-				-0.6
2,689,322	+				+0.8
2,689,322	+				+0.6
2,689,346	-				-0.1
2,689,359	+				-0.2
2,689,359	+				-0.9
2,689,359	+				+1.0
2,689,360	-				-0.9
2,689,360	-				-2.5
2,689,360	-				-0.3
2,689,455	+				+1.0
2,689,455	+				+0.5
2,689,455	+				-0.2
2,689,455	+				-1.1
2,689,456	-				+1.0
2,689,456	-				-0.4
2,689,456	-				-0.8
2,689,456	-				-0.7
2,689,456	-				-0.9
2,689,536	+		ABIE51_RS12420	0.28	-0.0
2,689,536	+		ABIE51_RS12420	0.28	+0.1
2,689,536	+		ABIE51_RS12420	0.28	+0.9
2,689,537	-		ABIE51_RS12420	0.28	-0.0
2,689,537	-		ABIE51_RS12420	0.28	+0.5
2,689,537	-		ABIE51_RS12420	0.28	-0.5
2,689,537	-		ABIE51_RS12420	0.28	+0.7
2,689,537	-		ABIE51_RS12420	0.28	-0.0
2,689,537	-		ABIE51_RS12420	0.28	+0.8
2,689,632	+		ABIE51_RS12420	0.55	+0.8
2,689,633	-		ABIE51_RS12420	0.55	+0.5
2,689,633	-		ABIE51_RS12420	0.55	+0.8
2,689,798	+				-0.9
2,689,798	+				+0.1
2,689,799	-				-1.4
2,689,828	+				+0.1
2,689,829	-				-0.4
2,689,846	+				-0.6
2,689,847	-				+0.1
2,689,847	-				+0.6
2,689,847	-				-0.4
2,689,847	-				-0.3
2,689,847	-				+1.4
2,689,847	-				-1.0
2,689,940	-		ABIE51_RS12425	0.11	+0.8
2,689,978	+		ABIE51_RS12425	0.14	-0.3
2,689,979	-		ABIE51_RS12425	0.14	+1.9
2,689,979	-		ABIE51_RS12425	0.14	+0.2
2,690,239	+		ABIE51_RS12425	0.35	+1.4
2,690,240	-		ABIE51_RS12425	0.35	-1.1
2,690,272	+		ABIE51_RS12425	0.37	-2.1
2,690,272	+		ABIE51_RS12425	0.37	-0.3
2,690,272	+		ABIE51_RS12425	0.37	-2.7
2,690,272	+		ABIE51_RS12425	0.37	-0.4
2,690,272	+		ABIE51_RS12425	0.37	-1.1
2,690,272	+		ABIE51_RS12425	0.37	-1.2
2,690,272	+		ABIE51_RS12425	0.37	-0.9
2,690,272	+		ABIE51_RS12425	0.37	-0.4
2,690,272	+		ABIE51_RS12425	0.37	+2.7
2,690,273	-		ABIE51_RS12425	0.37	-1.3
2,690,273	-		ABIE51_RS12425	0.37	+2.5
2,690,273	-		ABIE51_RS12425	0.37	+0.2
2,690,273	-		ABIE51_RS12425	0.37	-0.8
2,690,273	-		ABIE51_RS12425	0.37	-1.4
2,690,273	-		ABIE51_RS12425	0.37	-2.0
2,690,273	-		ABIE51_RS12425	0.37	-0.6
2,690,273	-		ABIE51_RS12425	0.37	+0.2
2,690,273	-		ABIE51_RS12425	0.37	-0.2
2,690,273	-		ABIE51_RS12425	0.37	-0.6
2,690,275	+		ABIE51_RS12425	0.37	-0.6
2,690,275	+		ABIE51_RS12425	0.37	-1.0
2,690,276	-		ABIE51_RS12425	0.37	-1.2
2,690,276	-		ABIE51_RS12425	0.37	-0.4
2,690,276	-		ABIE51_RS12425	0.37	-0.6
2,690,276	-		ABIE51_RS12425	0.37	-0.5
2,690,276	-		ABIE51_RS12425	0.37	-1.9
2,690,304	+		ABIE51_RS12425	0.40	+0.1
2,690,369	+		ABIE51_RS12425	0.45	+0.2
2,690,370	-		ABIE51_RS12425	0.45	-0.8
2,690,474	+		ABIE51_RS12425	0.53	-0.7
2,690,475	-		ABIE51_RS12425	0.53	+0.2
2,690,475	-		ABIE51_RS12425	0.53	-0.1
2,690,475	-		ABIE51_RS12425	0.53	-0.4
2,690,477	+		ABIE51_RS12425	0.53	-0.4
2,690,477	+		ABIE51_RS12425	0.53	+0.6
2,690,477	+		ABIE51_RS12425	0.53	+0.5
2,690,477	+		ABIE51_RS12425	0.53	-2.6
2,690,477	+		ABIE51_RS12425	0.53	-0.3
2,690,477	+		ABIE51_RS12425	0.53	-0.7
2,690,478	-		ABIE51_RS12425	0.53	+0.1
2,690,516	-		ABIE51_RS12425	0.56	-0.3
2,690,516	-		ABIE51_RS12425	0.56	-1.1
2,690,623	+		ABIE51_RS12425	0.65	-2.8
2,690,623	+		ABIE51_RS12425	0.65	+0.2
2,690,624	-		ABIE51_RS12425	0.65	-1.8
2,690,624	-		ABIE51_RS12425	0.65	-0.5
2,690,707	+		ABIE51_RS12425	0.71	+0.3
2,690,707	+		ABIE51_RS12425	0.71	-0.3
2,690,708	-		ABIE51_RS12425	0.71	+0.2
2,690,723	-		ABIE51_RS12425	0.72	-2.0
2,690,723	-		ABIE51_RS12425	0.72	-2.0
2,690,723	-		ABIE51_RS12425	0.72	-0.2
2,690,723	-		ABIE51_RS12425	0.72	-0.7
2,690,723	-		ABIE51_RS12425	0.72	-2.2
2,690,723	-		ABIE51_RS12425	0.72	+0.3