Experiment: D-Glucuronic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS03350 and ABIE51_RS03355 are separated by 111 nucleotides ABIE51_RS03355 and ABIE51_RS03360 are separated by 17 nucleotides
ABIE51_RS03350: ABIE51_RS03350 - patatin-like phospholipase family protein, at 742,556 to 743,434
_RS03350
ABIE51_RS03355: ABIE51_RS03355 - MBL fold metallo-hydrolase, at 743,546 to 744,499
_RS03355
ABIE51_RS03360: ABIE51_RS03360 - alpha/beta hydrolase, at 744,517 to 745,341
_RS03360
Position (kb) 743
744
745 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 742.547 kb on + strand at 742.547 kb on + strand at 742.548 kb on - strand at 742.572 kb on + strand at 742.572 kb on + strand at 742.572 kb on + strand at 742.573 kb on - strand at 742.573 kb on - strand at 742.638 kb on + strand at 742.639 kb on - strand at 742.671 kb on + strand, within ABIE51_RS03350 at 742.671 kb on + strand, within ABIE51_RS03350 at 742.820 kb on + strand, within ABIE51_RS03350 at 742.820 kb on + strand, within ABIE51_RS03350 at 742.821 kb on - strand, within ABIE51_RS03350 at 742.843 kb on - strand, within ABIE51_RS03350 at 742.843 kb on - strand, within ABIE51_RS03350 at 742.843 kb on - strand, within ABIE51_RS03350 at 742.884 kb on - strand, within ABIE51_RS03350 at 742.884 kb on - strand, within ABIE51_RS03350 at 742.935 kb on + strand, within ABIE51_RS03350 at 742.935 kb on + strand, within ABIE51_RS03350 at 742.935 kb on + strand, within ABIE51_RS03350 at 742.936 kb on - strand, within ABIE51_RS03350 at 742.936 kb on - strand, within ABIE51_RS03350 at 742.936 kb on - strand, within ABIE51_RS03350 at 743.039 kb on + strand, within ABIE51_RS03350 at 743.040 kb on - strand, within ABIE51_RS03350 at 743.040 kb on - strand, within ABIE51_RS03350 at 743.040 kb on - strand, within ABIE51_RS03350 at 743.042 kb on - strand, within ABIE51_RS03350 at 743.056 kb on + strand, within ABIE51_RS03350 at 743.057 kb on - strand, within ABIE51_RS03350 at 743.143 kb on - strand, within ABIE51_RS03350 at 743.222 kb on + strand, within ABIE51_RS03350 at 743.222 kb on + strand, within ABIE51_RS03350 at 743.222 kb on + strand, within ABIE51_RS03350 at 743.222 kb on + strand, within ABIE51_RS03350 at 743.222 kb on + strand, within ABIE51_RS03350 at 743.223 kb on - strand, within ABIE51_RS03350 at 743.223 kb on - strand, within ABIE51_RS03350 at 743.223 kb on - strand, within ABIE51_RS03350 at 743.223 kb on - strand, within ABIE51_RS03350 at 743.223 kb on - strand, within ABIE51_RS03350 at 743.223 kb on - strand, within ABIE51_RS03350 at 743.466 kb on + strand at 743.466 kb on + strand at 743.466 kb on + strand at 743.466 kb on + strand at 743.466 kb on + strand at 743.466 kb on + strand at 743.467 kb on - strand at 743.467 kb on - strand at 743.490 kb on + strand at 743.560 kb on - strand at 743.627 kb on - strand at 743.856 kb on + strand, within ABIE51_RS03355 at 743.856 kb on + strand, within ABIE51_RS03355 at 743.856 kb on + strand, within ABIE51_RS03355 at 743.856 kb on + strand, within ABIE51_RS03355 at 743.857 kb on - strand, within ABIE51_RS03355 at 743.857 kb on - strand, within ABIE51_RS03355 at 743.875 kb on + strand, within ABIE51_RS03355 at 743.876 kb on - strand, within ABIE51_RS03355 at 743.876 kb on - strand, within ABIE51_RS03355 at 743.876 kb on - strand, within ABIE51_RS03355 at 743.876 kb on - strand, within ABIE51_RS03355 at 743.910 kb on + strand, within ABIE51_RS03355 at 743.910 kb on + strand, within ABIE51_RS03355 at 743.916 kb on + strand, within ABIE51_RS03355 at 743.917 kb on - strand, within ABIE51_RS03355 at 743.917 kb on - strand, within ABIE51_RS03355 at 744.045 kb on + strand, within ABIE51_RS03355 at 744.046 kb on - strand, within ABIE51_RS03355 at 744.046 kb on - strand, within ABIE51_RS03355 at 744.081 kb on + strand, within ABIE51_RS03355 at 744.082 kb on - strand, within ABIE51_RS03355 at 744.082 kb on - strand, within ABIE51_RS03355 at 744.148 kb on + strand, within ABIE51_RS03355 at 744.149 kb on - strand, within ABIE51_RS03355 at 744.149 kb on - strand, within ABIE51_RS03355 at 744.149 kb on - strand, within ABIE51_RS03355 at 744.184 kb on + strand, within ABIE51_RS03355 at 744.321 kb on - strand, within ABIE51_RS03355 at 744.457 kb on + strand at 744.458 kb on - strand at 744.495 kb on + strand at 744.495 kb on + strand at 744.495 kb on + strand at 744.496 kb on - strand at 744.496 kb on - strand at 744.496 kb on - strand at 744.496 kb on - strand at 744.514 kb on + strand at 744.514 kb on + strand at 744.596 kb on + strand at 744.597 kb on - strand at 744.758 kb on + strand, within ABIE51_RS03360 at 744.758 kb on + strand, within ABIE51_RS03360 at 744.758 kb on + strand, within ABIE51_RS03360 at 744.759 kb on - strand, within ABIE51_RS03360 at 744.759 kb on - strand, within ABIE51_RS03360 at 744.759 kb on - strand, within ABIE51_RS03360 at 745.032 kb on - strand, within ABIE51_RS03360 at 745.124 kb on + strand, within ABIE51_RS03360 at 745.125 kb on - strand, within ABIE51_RS03360 at 745.125 kb on - strand, within ABIE51_RS03360 at 745.125 kb on - strand, within ABIE51_RS03360 at 745.125 kb on - strand, within ABIE51_RS03360 at 745.125 kb on - strand, within ABIE51_RS03360 at 745.199 kb on + strand, within ABIE51_RS03360 at 745.266 kb on + strand at 745.267 kb on - strand at 745.301 kb on + strand at 745.302 kb on - strand at 745.302 kb on - strand at 745.302 kb on - strand at 745.304 kb on + strand at 745.305 kb on - strand at 745.305 kb on - strand at 745.305 kb on - strand at 745.305 kb on - strand at 745.329 kb on + strand at 745.365 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucuronic Acid (C) remove 742,547 + +1.7 742,547 + +1.1 742,548 - -0.4 742,572 + -0.2 742,572 + -1.0 742,572 + -0.5 742,573 - -1.2 742,573 - +0.1 742,638 + +1.2 742,639 - -0.3 742,671 + ABIE51_RS03350 0.13 +0.3 742,671 + ABIE51_RS03350 0.13 -1.3 742,820 + ABIE51_RS03350 0.30 +0.3 742,820 + ABIE51_RS03350 0.30 +0.4 742,821 - ABIE51_RS03350 0.30 +0.1 742,843 - ABIE51_RS03350 0.33 +1.6 742,843 - ABIE51_RS03350 0.33 +2.8 742,843 - ABIE51_RS03350 0.33 -0.2 742,884 - ABIE51_RS03350 0.37 +0.5 742,884 - ABIE51_RS03350 0.37 -0.3 742,935 + ABIE51_RS03350 0.43 -1.6 742,935 + ABIE51_RS03350 0.43 +0.5 742,935 + ABIE51_RS03350 0.43 +0.4 742,936 - ABIE51_RS03350 0.43 -0.2 742,936 - ABIE51_RS03350 0.43 +0.1 742,936 - ABIE51_RS03350 0.43 +0.5 743,039 + ABIE51_RS03350 0.55 -0.5 743,040 - ABIE51_RS03350 0.55 -0.7 743,040 - ABIE51_RS03350 0.55 -0.2 743,040 - ABIE51_RS03350 0.55 -0.5 743,042 - ABIE51_RS03350 0.55 +0.8 743,056 + ABIE51_RS03350 0.57 +1.2 743,057 - ABIE51_RS03350 0.57 +1.0 743,143 - ABIE51_RS03350 0.67 -0.1 743,222 + ABIE51_RS03350 0.76 -0.7 743,222 + ABIE51_RS03350 0.76 +0.4 743,222 + ABIE51_RS03350 0.76 +0.9 743,222 + ABIE51_RS03350 0.76 +0.1 743,222 + ABIE51_RS03350 0.76 -0.7 743,223 - ABIE51_RS03350 0.76 +0.1 743,223 - ABIE51_RS03350 0.76 -0.2 743,223 - ABIE51_RS03350 0.76 +1.4 743,223 - ABIE51_RS03350 0.76 -0.4 743,223 - ABIE51_RS03350 0.76 +0.4 743,223 - ABIE51_RS03350 0.76 +0.2 743,466 + +0.9 743,466 + +1.6 743,466 + +0.0 743,466 + -1.1 743,466 + -0.3 743,466 + -0.0 743,467 - -0.1 743,467 - -1.1 743,490 + -0.0 743,560 - -2.2 743,627 - -0.3 743,856 + ABIE51_RS03355 0.32 +2.3 743,856 + ABIE51_RS03355 0.32 -0.1 743,856 + ABIE51_RS03355 0.32 +0.9 743,856 + ABIE51_RS03355 0.32 +0.1 743,857 - ABIE51_RS03355 0.33 +0.3 743,857 - ABIE51_RS03355 0.33 -0.5 743,875 + ABIE51_RS03355 0.34 -1.0 743,876 - ABIE51_RS03355 0.35 -0.5 743,876 - ABIE51_RS03355 0.35 -0.8 743,876 - ABIE51_RS03355 0.35 -1.2 743,876 - ABIE51_RS03355 0.35 +0.8 743,910 + ABIE51_RS03355 0.38 -0.1 743,910 + ABIE51_RS03355 0.38 -1.5 743,916 + ABIE51_RS03355 0.39 -0.5 743,917 - ABIE51_RS03355 0.39 +0.8 743,917 - ABIE51_RS03355 0.39 +0.5 744,045 + ABIE51_RS03355 0.52 -0.5 744,046 - ABIE51_RS03355 0.52 -0.3 744,046 - ABIE51_RS03355 0.52 -0.1 744,081 + ABIE51_RS03355 0.56 +0.6 744,082 - ABIE51_RS03355 0.56 -0.2 744,082 - ABIE51_RS03355 0.56 -3.5 744,148 + ABIE51_RS03355 0.63 +0.3 744,149 - ABIE51_RS03355 0.63 +0.6 744,149 - ABIE51_RS03355 0.63 -0.2 744,149 - ABIE51_RS03355 0.63 -0.6 744,184 + ABIE51_RS03355 0.67 +0.9 744,321 - ABIE51_RS03355 0.81 -2.3 744,457 + -0.1 744,458 - -1.2 744,495 + -0.8 744,495 + -0.0 744,495 + -0.8 744,496 - +0.3 744,496 - +0.2 744,496 - -0.3 744,496 - +0.1 744,514 + -2.5 744,514 + -0.7 744,596 + +0.6 744,597 - -0.1 744,758 + ABIE51_RS03360 0.29 +0.7 744,758 + ABIE51_RS03360 0.29 +0.5 744,758 + ABIE51_RS03360 0.29 +1.2 744,759 - ABIE51_RS03360 0.29 +0.1 744,759 - ABIE51_RS03360 0.29 +0.8 744,759 - ABIE51_RS03360 0.29 -0.3 745,032 - ABIE51_RS03360 0.62 +0.2 745,124 + ABIE51_RS03360 0.74 -1.1 745,125 - ABIE51_RS03360 0.74 +0.5 745,125 - ABIE51_RS03360 0.74 -0.7 745,125 - ABIE51_RS03360 0.74 +0.5 745,125 - ABIE51_RS03360 0.74 -0.2 745,125 - ABIE51_RS03360 0.74 +0.8 745,199 + ABIE51_RS03360 0.83 -2.5 745,266 + +0.6 745,267 - +0.0 745,301 + -1.3 745,302 - -1.2 745,302 - -0.4 745,302 - -0.6 745,304 + +0.9 745,305 - -0.4 745,305 - -0.2 745,305 - +0.1 745,305 - +2.4 745,329 + +0.5 745,365 + +0.8
Or see this region's nucleotide sequence