Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21650 and SM_b21651 overlap by 18 nucleotides
SM_b21650: SM_b21650 - LacI family transcriptional regulator, at 1,681,406 to 1,682,485
_b21650
SM_b21651: SM_b21651 - plasmid stability protein, at 1,682,468 to 1,682,881
_b21651
Position (kb)
1682
1683 Strain fitness (log2 ratio)
-1
0
1
2 at 1681.475 kb on + strand at 1681.476 kb on - strand at 1681.492 kb on + strand at 1681.493 kb on - strand at 1681.493 kb on - strand at 1681.493 kb on - strand at 1681.544 kb on + strand, within SM_b21650 at 1681.545 kb on - strand, within SM_b21650 at 1681.655 kb on + strand, within SM_b21650 at 1681.655 kb on + strand, within SM_b21650 at 1681.655 kb on + strand, within SM_b21650 at 1681.656 kb on - strand, within SM_b21650 at 1681.793 kb on + strand, within SM_b21650 at 1681.851 kb on - strand, within SM_b21650 at 1681.851 kb on - strand, within SM_b21650 at 1681.979 kb on + strand, within SM_b21650 at 1681.980 kb on - strand, within SM_b21650 at 1682.021 kb on + strand, within SM_b21650 at 1682.022 kb on - strand, within SM_b21650 at 1682.022 kb on - strand, within SM_b21650 at 1682.024 kb on - strand, within SM_b21650 at 1682.052 kb on - strand, within SM_b21650 at 1682.100 kb on - strand, within SM_b21650 at 1682.100 kb on - strand, within SM_b21650 at 1682.168 kb on - strand, within SM_b21650 at 1682.168 kb on - strand, within SM_b21650 at 1682.168 kb on - strand, within SM_b21650 at 1682.224 kb on + strand, within SM_b21650 at 1682.559 kb on - strand, within SM_b21651 at 1682.632 kb on - strand, within SM_b21651 at 1682.661 kb on + strand, within SM_b21651 at 1682.661 kb on + strand, within SM_b21651 at 1682.661 kb on + strand, within SM_b21651 at 1682.662 kb on - strand, within SM_b21651 at 1682.662 kb on - strand, within SM_b21651 at 1682.662 kb on - strand, within SM_b21651 at 1682.663 kb on + strand, within SM_b21651 at 1682.663 kb on + strand, within SM_b21651 at 1682.752 kb on - strand, within SM_b21651 at 1682.871 kb on - strand at 1683.011 kb on + strand at 1683.012 kb on - strand at 1683.012 kb on - strand at 1683.013 kb on + strand at 1683.014 kb on - strand at 1683.150 kb on + strand at 1683.152 kb on + strand at 1683.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 1,681,475 + +1.7 1,681,476 - +1.4 1,681,492 + +1.2 1,681,493 - +0.5 1,681,493 - +1.3 1,681,493 - +1.1 1,681,544 + SM_b21650 0.13 +1.4 1,681,545 - SM_b21650 0.13 -0.0 1,681,655 + SM_b21650 0.23 +0.3 1,681,655 + SM_b21650 0.23 -0.5 1,681,655 + SM_b21650 0.23 +0.6 1,681,656 - SM_b21650 0.23 +0.8 1,681,793 + SM_b21650 0.36 +1.2 1,681,851 - SM_b21650 0.41 +0.5 1,681,851 - SM_b21650 0.41 +0.5 1,681,979 + SM_b21650 0.53 +0.8 1,681,980 - SM_b21650 0.53 +0.6 1,682,021 + SM_b21650 0.57 +0.7 1,682,022 - SM_b21650 0.57 +1.3 1,682,022 - SM_b21650 0.57 +1.9 1,682,024 - SM_b21650 0.57 -0.3 1,682,052 - SM_b21650 0.60 +0.5 1,682,100 - SM_b21650 0.64 +1.4 1,682,100 - SM_b21650 0.64 +0.6 1,682,168 - SM_b21650 0.71 -0.5 1,682,168 - SM_b21650 0.71 +0.3 1,682,168 - SM_b21650 0.71 -0.3 1,682,224 + SM_b21650 0.76 +1.2 1,682,559 - SM_b21651 0.22 -1.0 1,682,632 - SM_b21651 0.40 -0.3 1,682,661 + SM_b21651 0.47 +0.5 1,682,661 + SM_b21651 0.47 +0.4 1,682,661 + SM_b21651 0.47 +0.2 1,682,662 - SM_b21651 0.47 -0.1 1,682,662 - SM_b21651 0.47 +0.1 1,682,662 - SM_b21651 0.47 +1.1 1,682,663 + SM_b21651 0.47 -0.1 1,682,663 + SM_b21651 0.47 -0.1 1,682,752 - SM_b21651 0.69 +1.3 1,682,871 - +0.5 1,683,011 + -1.1 1,683,012 - -0.3 1,683,012 - -1.6 1,683,013 + -0.0 1,683,014 - -0.7 1,683,150 + -0.6 1,683,152 + -0.1 1,683,172 - -0.7
Or see this region's nucleotide sequence