Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21131 and SM_b21132 overlap by 17 nucleotides SM_b21132 and SM_b21133 overlap by 4 nucleotides SM_b21133 and SM_b21134 are separated by 264 nucleotides
SM_b21131: SM_b21131 - sulfate ABC transporter permease, at 770,163 to 771,044
_b21131
SM_b21132: SM_b21132 - sulfate ABC transporter permease, at 771,028 to 771,894
_b21132
SM_b21133: SM_b21133 - sulfate ABC transporter substrate-binding protein, at 771,891 to 772,916
_b21133
SM_b21134: SM_b21134 - amino acid processing enzyme, low specificity D-threonine aldolase, at 773,181 to 774,239
_b21134
Position (kb) 771
772
773 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 771.008 kb on + strand at 771.009 kb on - strand at 771.012 kb on - strand at 771.012 kb on - strand at 771.020 kb on - strand at 771.038 kb on + strand at 771.044 kb on + strand at 771.044 kb on + strand at 771.230 kb on + strand, within SM_b21132 at 771.231 kb on - strand, within SM_b21132 at 771.510 kb on - strand, within SM_b21132 at 771.510 kb on - strand, within SM_b21132 at 771.908 kb on - strand at 771.908 kb on - strand at 771.908 kb on - strand at 772.052 kb on - strand, within SM_b21133 at 772.054 kb on + strand, within SM_b21133 at 772.054 kb on + strand, within SM_b21133 at 772.055 kb on - strand, within SM_b21133 at 772.091 kb on - strand, within SM_b21133 at 772.096 kb on + strand, within SM_b21133 at 772.096 kb on + strand, within SM_b21133 at 772.105 kb on + strand, within SM_b21133 at 772.240 kb on + strand, within SM_b21133 at 772.241 kb on - strand, within SM_b21133 at 772.266 kb on + strand, within SM_b21133 at 772.266 kb on + strand, within SM_b21133 at 772.266 kb on + strand, within SM_b21133 at 772.266 kb on + strand, within SM_b21133 at 772.266 kb on + strand, within SM_b21133 at 772.267 kb on - strand, within SM_b21133 at 772.357 kb on + strand, within SM_b21133 at 772.357 kb on + strand, within SM_b21133 at 772.357 kb on + strand, within SM_b21133 at 772.386 kb on - strand, within SM_b21133 at 772.552 kb on + strand, within SM_b21133 at 772.553 kb on - strand, within SM_b21133 at 772.783 kb on + strand, within SM_b21133 at 772.784 kb on - strand, within SM_b21133 at 772.784 kb on - strand, within SM_b21133 at 772.784 kb on - strand, within SM_b21133 at 772.804 kb on + strand, within SM_b21133 at 772.804 kb on + strand, within SM_b21133 at 772.904 kb on + strand at 772.904 kb on + strand at 772.905 kb on - strand at 772.979 kb on - strand at 772.987 kb on + strand at 772.988 kb on - strand at 773.080 kb on - strand at 773.116 kb on + strand at 773.145 kb on + strand at 773.145 kb on + strand at 773.145 kb on + strand at 773.146 kb on - strand at 773.372 kb on + strand, within SM_b21134 at 773.376 kb on + strand, within SM_b21134 at 773.376 kb on + strand, within SM_b21134 at 773.377 kb on - strand, within SM_b21134 at 773.377 kb on - strand, within SM_b21134 at 773.377 kb on - strand, within SM_b21134 at 773.377 kb on - strand, within SM_b21134 at 773.377 kb on - strand, within SM_b21134 at 773.377 kb on - strand, within SM_b21134 at 773.419 kb on - strand, within SM_b21134 at 773.559 kb on - strand, within SM_b21134 at 773.560 kb on + strand, within SM_b21134 at 773.560 kb on + strand, within SM_b21134 at 773.561 kb on - strand, within SM_b21134 at 773.561 kb on - strand, within SM_b21134 at 773.561 kb on - strand, within SM_b21134 at 773.566 kb on + strand, within SM_b21134 at 773.566 kb on + strand, within SM_b21134 at 773.567 kb on - strand, within SM_b21134 at 773.567 kb on - strand, within SM_b21134 at 773.567 kb on - strand, within SM_b21134 at 773.570 kb on + strand, within SM_b21134 at 773.570 kb on + strand, within SM_b21134 at 773.571 kb on - strand, within SM_b21134 at 773.571 kb on - strand, within SM_b21134 at 773.618 kb on + strand, within SM_b21134 at 773.639 kb on + strand, within SM_b21134 at 773.639 kb on + strand, within SM_b21134 at 773.639 kb on + strand, within SM_b21134 at 773.640 kb on - strand, within SM_b21134 at 773.640 kb on - strand, within SM_b21134 at 773.640 kb on - strand, within SM_b21134 at 773.640 kb on - strand, within SM_b21134 at 773.642 kb on + strand, within SM_b21134 at 773.732 kb on - strand, within SM_b21134 at 773.732 kb on - strand, within SM_b21134 at 773.732 kb on - strand, within SM_b21134
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 771,008 + -1.3 771,009 - -2.5 771,012 - -1.7 771,012 - -1.3 771,020 - -0.2 771,038 + -0.7 771,044 + -1.4 771,044 + -1.2 771,230 + SM_b21132 0.23 -1.4 771,231 - SM_b21132 0.23 -0.8 771,510 - SM_b21132 0.56 -0.6 771,510 - SM_b21132 0.56 +0.0 771,908 - -0.8 771,908 - -0.3 771,908 - +0.5 772,052 - SM_b21133 0.16 -0.6 772,054 + SM_b21133 0.16 -0.2 772,054 + SM_b21133 0.16 -1.4 772,055 - SM_b21133 0.16 -0.8 772,091 - SM_b21133 0.19 -1.0 772,096 + SM_b21133 0.20 -1.2 772,096 + SM_b21133 0.20 -1.5 772,105 + SM_b21133 0.21 -0.1 772,240 + SM_b21133 0.34 +0.1 772,241 - SM_b21133 0.34 -1.3 772,266 + SM_b21133 0.37 -1.4 772,266 + SM_b21133 0.37 -1.2 772,266 + SM_b21133 0.37 -1.4 772,266 + SM_b21133 0.37 -0.6 772,266 + SM_b21133 0.37 -1.1 772,267 - SM_b21133 0.37 -3.0 772,357 + SM_b21133 0.45 -0.4 772,357 + SM_b21133 0.45 +1.2 772,357 + SM_b21133 0.45 -1.3 772,386 - SM_b21133 0.48 -0.8 772,552 + SM_b21133 0.64 -1.4 772,553 - SM_b21133 0.65 -0.9 772,783 + SM_b21133 0.87 -1.4 772,784 - SM_b21133 0.87 -1.7 772,784 - SM_b21133 0.87 -0.0 772,784 - SM_b21133 0.87 -0.9 772,804 + SM_b21133 0.89 -0.2 772,804 + SM_b21133 0.89 -1.2 772,904 + -0.5 772,904 + -0.8 772,905 - -0.8 772,979 - -0.4 772,987 + -0.7 772,988 - -0.8 773,080 - +0.1 773,116 + -0.6 773,145 + -0.1 773,145 + -0.1 773,145 + -0.3 773,146 - +0.6 773,372 + SM_b21134 0.18 -0.8 773,376 + SM_b21134 0.18 +0.3 773,376 + SM_b21134 0.18 +0.5 773,377 - SM_b21134 0.19 -0.9 773,377 - SM_b21134 0.19 +0.1 773,377 - SM_b21134 0.19 +0.4 773,377 - SM_b21134 0.19 +0.1 773,377 - SM_b21134 0.19 +0.8 773,377 - SM_b21134 0.19 -0.0 773,419 - SM_b21134 0.22 -0.7 773,559 - SM_b21134 0.36 -2.8 773,560 + SM_b21134 0.36 +0.2 773,560 + SM_b21134 0.36 +0.3 773,561 - SM_b21134 0.36 +0.3 773,561 - SM_b21134 0.36 -0.3 773,561 - SM_b21134 0.36 +0.1 773,566 + SM_b21134 0.36 -1.0 773,566 + SM_b21134 0.36 -0.5 773,567 - SM_b21134 0.36 -0.0 773,567 - SM_b21134 0.36 -0.1 773,567 - SM_b21134 0.36 -0.3 773,570 + SM_b21134 0.37 +0.1 773,570 + SM_b21134 0.37 -0.3 773,571 - SM_b21134 0.37 +1.9 773,571 - SM_b21134 0.37 -0.8 773,618 + SM_b21134 0.41 -1.1 773,639 + SM_b21134 0.43 +0.2 773,639 + SM_b21134 0.43 +1.0 773,639 + SM_b21134 0.43 +0.2 773,640 - SM_b21134 0.43 -0.2 773,640 - SM_b21134 0.43 +0.7 773,640 - SM_b21134 0.43 +0.0 773,640 - SM_b21134 0.43 -0.5 773,642 + SM_b21134 0.44 -0.1 773,732 - SM_b21134 0.52 -0.0 773,732 - SM_b21134 0.52 -0.2 773,732 - SM_b21134 0.52 +0.5
Or see this region's nucleotide sequence