Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33735

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,994,777	+		RR42_RS33730	0.41	-0.1
2,994,777	+		RR42_RS33730	0.41	+1.0
2,994,777	+		RR42_RS33730	0.41	-0.2
2,994,778	-		RR42_RS33730	0.41	-1.0
2,994,778	-		RR42_RS33730	0.41	-0.8
2,994,984	-		RR42_RS33730	0.57	-1.0
2,995,147	-		RR42_RS33730	0.70	-0.6
2,995,437	+				-0.3
2,995,438	-				-0.8
2,995,502	+				-0.8
2,995,503	-				-0.7
2,995,717	+				-0.2
2,995,718	-				-0.0
2,995,882	+		RR42_RS33735	0.21	+2.1
2,995,899	+		RR42_RS33735	0.22	-0.1
2,995,997	-		RR42_RS33735	0.29	-0.4
2,995,997	-		RR42_RS33735	0.29	-0.6
2,996,110	+		RR42_RS33735	0.37	+0.3
2,996,110	+		RR42_RS33735	0.37	+1.2
2,996,111	-		RR42_RS33735	0.37	+0.4
2,996,468	-		RR42_RS33735	0.62	-0.1
2,997,016	+				+0.7
2,997,075	-				+0.1
2,997,478	-		RR42_RS33740	0.36	+0.8
2,997,478	-		RR42_RS33740	0.36	-0.5
2,997,478	-		RR42_RS33740	0.36	+0.3
2,997,481	+		RR42_RS33740	0.36	-0.4
2,997,481	+		RR42_RS33740	0.36	+0.6
2,997,482	-		RR42_RS33740	0.36	-0.3
2,997,741	+		RR42_RS33740	0.56	+0.3
2,997,762	-		RR42_RS33740	0.58	+1.5
2,997,806	+		RR42_RS33740	0.61	+0.4
2,997,806	+		RR42_RS33740	0.61	-1.0
2,997,807	-		RR42_RS33740	0.61	+0.1
2,997,924	-		RR42_RS33740	0.70	-0.4
2,997,968	-		RR42_RS33740	0.74	-0.3