Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33585

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,962,541	+		RR42_RS33580	0.44	+0.4
2,962,715	+		RR42_RS33580	0.63	+0.8
2,962,715	+		RR42_RS33580	0.63	+1.3
2,962,755	-		RR42_RS33580	0.68	-0.7
2,962,839	-		RR42_RS33580	0.77	+1.0
2,962,997	+				-0.6
2,962,997	+				-0.1
2,963,044	+				+0.3
2,963,044	+				-1.6
2,963,044	+				-1.7
2,963,044	+				-1.0
2,963,044	+				-3.6
2,963,044	+				-1.8
2,963,044	+				+0.5
2,963,045	-				-0.1
2,963,045	-				-1.3
2,963,045	-				-1.0
2,963,045	-				-1.0
2,963,045	-				-0.3
2,963,045	-				-1.1
2,963,045	-				+0.1
2,963,411	-				+0.0
2,963,538	+		RR42_RS33585	0.21	+0.1
2,963,538	+		RR42_RS33585	0.21	-0.3
2,963,749	+		RR42_RS33585	0.44	+1.3
2,963,749	+		RR42_RS33585	0.44	+0.3
2,963,749	+		RR42_RS33585	0.44	-0.9
2,963,749	+		RR42_RS33585	0.44	-1.1
2,963,750	-		RR42_RS33585	0.44	-0.2
2,963,769	+		RR42_RS33585	0.46	-0.3
2,963,769	+		RR42_RS33585	0.46	-0.6
2,963,770	-		RR42_RS33585	0.46	+0.4
2,963,770	-		RR42_RS33585	0.46	+0.4
2,963,784	+		RR42_RS33585	0.47	+0.6
2,963,785	-		RR42_RS33585	0.48	-0.3
2,963,785	-		RR42_RS33585	0.48	+0.4
2,963,857	+		RR42_RS33585	0.55	+0.2
2,963,857	+		RR42_RS33585	0.55	+0.6
2,963,858	-		RR42_RS33585	0.55	+0.6
2,963,858	-		RR42_RS33585	0.55	-0.8
2,963,858	-		RR42_RS33585	0.55	-0.2
2,963,864	+		RR42_RS33585	0.56	-0.1
2,963,864	+		RR42_RS33585	0.56	-0.4
2,963,864	+		RR42_RS33585	0.56	-0.5
2,963,864	+		RR42_RS33585	0.56	+1.2
2,963,875	+		RR42_RS33585	0.57	+1.2
2,964,000	+		RR42_RS33585	0.71	+0.5
2,964,022	+		RR42_RS33585	0.73	+0.3
2,964,023	-		RR42_RS33585	0.73	+0.0
2,964,023	-		RR42_RS33585	0.73	-0.9
2,964,025	+		RR42_RS33585	0.73	-0.5
2,964,025	+		RR42_RS33585	0.73	+0.1
2,964,026	-		RR42_RS33585	0.73	-0.1
2,964,074	-		RR42_RS33585	0.79	+0.3
2,964,123	+		RR42_RS33585	0.84	+0.2
2,964,124	+		RR42_RS33585	0.84	+1.6
2,964,125	-		RR42_RS33585	0.84	-0.0
2,964,125	-		RR42_RS33585	0.84	+1.0
2,964,286	+				-0.2
2,964,286	+				+1.5
2,964,331	-				+0.5
2,964,407	+				+0.1
2,964,485	+		RR42_RS33590	0.14	-0.6
2,964,506	+		RR42_RS33590	0.17	+0.1
2,964,655	-		RR42_RS33590	0.36	+0.3
2,964,730	-		RR42_RS33590	0.46	-0.8
2,964,733	-		RR42_RS33590	0.47	+1.5
2,964,739	-		RR42_RS33590	0.48	+0.7
2,964,753	+		RR42_RS33590	0.49	+0.2
2,964,753	+		RR42_RS33590	0.49	-1.1
2,964,754	-		RR42_RS33590	0.50	+0.4
2,964,754	-		RR42_RS33590	0.50	-1.0
2,964,892	-		RR42_RS33590	0.68	+0.6
2,964,892	-		RR42_RS33590	0.68	+0.2
2,965,078	+				+0.4
2,965,078	+				+0.2
2,965,078	+				-1.2
2,965,079	-				-0.3