Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33160

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,843,564	+		RR42_RS33150	0.12	-0.3
2,843,565	-		RR42_RS33150	0.12	+0.1
2,843,565	-		RR42_RS33150	0.12	-0.2
2,843,565	-		RR42_RS33150	0.12	-2.2
2,843,894	+				+0.6
2,843,950	+				-0.9
2,843,950	+				+1.3
2,843,951	-				-0.3
2,844,018	+		RR42_RS33155	0.20	-0.2
2,844,018	+		RR42_RS33155	0.20	+0.0
2,844,019	-		RR42_RS33155	0.21	-0.5
2,844,019	-		RR42_RS33155	0.21	-0.1
2,844,047	+		RR42_RS33155	0.36	-0.2
2,844,120	+		RR42_RS33155	0.77	+0.5
2,844,120	+		RR42_RS33155	0.77	-0.6
2,844,120	+		RR42_RS33155	0.77	-0.1
2,844,120	+		RR42_RS33155	0.77	+0.1
2,844,121	-		RR42_RS33155	0.77	-0.8
2,844,121	-		RR42_RS33155	0.77	-2.5
2,844,121	-		RR42_RS33155	0.77	-0.2
2,844,121	-		RR42_RS33155	0.77	+0.9
2,844,159	+				+0.5
2,844,219	+				-0.4
2,844,220	-				+0.2
2,844,220	-				+0.8
2,844,222	+				-0.7
2,844,300	+				-0.7
2,844,300	+				-2.2
2,844,301	-				+0.2
2,844,301	-				-0.8
2,844,301	-				-0.3
2,844,359	+		RR42_RS33160	0.18	-0.0
2,844,359	+		RR42_RS33160	0.18	-0.5
2,844,369	+		RR42_RS33160	0.20	-1.3
2,844,370	-		RR42_RS33160	0.20	-0.6
2,844,411	+		RR42_RS33160	0.27	-0.3
2,844,426	+		RR42_RS33160	0.29	+0.6
2,844,426	+		RR42_RS33160	0.29	-0.3
2,844,426	+		RR42_RS33160	0.29	+1.4
2,844,427	-		RR42_RS33160	0.30	+0.6
2,844,575	+		RR42_RS33160	0.55	+0.2
2,844,901	-				+0.2
2,844,901	-				+0.2
2,844,910	+				+0.0
2,844,967	+				-0.9
2,844,967	+				+0.2
2,844,971	+				+0.2
2,844,971	+				+1.0
2,844,971	+				+0.1
2,844,972	-				+1.6
2,844,972	-				+0.3
2,844,972	-				+0.3
2,844,972	-				-1.3
2,844,972	-				+0.5
2,845,026	+				-0.9
2,845,026	+				-0.4
2,845,026	+				-0.6
2,845,026	+				-0.6
2,845,027	-				-0.1
2,845,031	+				-0.1
2,845,031	+				+0.7
2,845,032	-				-0.2
2,845,073	+				-0.7
2,845,073	+				+0.0
2,845,074	-				-0.6
2,845,292	+		RR42_RS33165	0.31	-0.5
2,845,523	+		RR42_RS33165	0.59	-0.2
2,845,721	+		RR42_RS33165	0.83	-0.3
2,845,722	-		RR42_RS33165	0.83	-0.4
2,845,725	+		RR42_RS33165	0.83	+1.5
2,845,725	+		RR42_RS33165	0.83	+0.5
2,845,725	+		RR42_RS33165	0.83	-1.6
2,845,725	+		RR42_RS33165	0.83	+0.3
2,845,725	+		RR42_RS33165	0.83	-0.1
2,845,726	-		RR42_RS33165	0.83	+2.6
2,845,726	-		RR42_RS33165	0.83	+1.1
2,845,726	-		RR42_RS33165	0.83	+0.4
2,845,726	-		RR42_RS33165	0.83	-0.5
2,845,726	-		RR42_RS33165	0.83	+1.4
2,845,726	-		RR42_RS33165	0.83	-0.1
2,845,726	-		RR42_RS33165	0.83	-0.5
2,845,726	-		RR42_RS33165	0.83	-0.6