Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33090

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,830,060	+		RR42_RS33085	0.61	+0.1
2,830,189	+		RR42_RS33085	0.67	-0.1
2,830,189	+		RR42_RS33085	0.67	+0.4
2,830,234	+		RR42_RS33085	0.69	-0.2
2,830,234	+		RR42_RS33085	0.69	-0.4
2,830,234	+		RR42_RS33085	0.69	+0.0
2,830,234	+		RR42_RS33085	0.69	+0.8
2,830,234	+		RR42_RS33085	0.69	+1.2
2,830,235	-		RR42_RS33085	0.69	-1.0
2,830,543	+		RR42_RS33085	0.83	-0.2
2,830,649	-		RR42_RS33085	0.88	-1.7
2,830,649	-		RR42_RS33085	0.88	-0.1
2,830,651	+		RR42_RS33085	0.88	+0.4
2,830,651	+		RR42_RS33085	0.88	-0.4
2,830,652	-		RR42_RS33085	0.88	+0.1
2,830,652	-		RR42_RS33085	0.88	-0.5
2,830,652	-		RR42_RS33085	0.88	+0.0
2,830,708	+				-2.8
2,830,708	+				+0.1
2,830,708	+				+1.8
2,830,709	-				+0.3
2,830,778	-				+0.3
2,830,837	+				-1.3
2,830,837	+				+0.2
2,830,837	+				+0.0
2,830,837	+				-1.2
2,830,838	-				-0.6
2,830,838	-				-0.4
2,830,840	+				-0.2
2,830,862	-				+0.0
2,830,911	+				+0.5
2,830,911	+				+0.0
2,830,911	+				-0.5
2,830,911	+				-0.1
2,830,912	-				-0.6
2,830,912	-				-2.4
2,830,912	-				+0.4
2,830,912	-				+0.0
2,830,915	+				-0.2
2,830,915	+				+0.6
2,830,915	+				+0.2
2,830,915	+				-0.2
2,830,915	+				+0.6
2,830,915	+				+1.4
2,830,915	+				-0.7
2,830,915	+				+0.7
2,830,915	+				+2.3
2,830,916	-				+0.5
2,830,916	-				+0.9
2,830,951	+				+0.0
2,830,951	+				+0.2
2,831,067	-				-0.4
2,831,079	+				+0.3
2,831,080	-				+0.4
2,831,084	+				+0.6
2,831,084	+				+0.0
2,831,085	-				+0.9
2,831,085	-				+0.0
2,831,170	-		RR42_RS33090	0.11	+0.3
2,831,334	-		RR42_RS33090	0.23	-0.1
2,831,667	+		RR42_RS33090	0.46	-0.7
2,831,669	+		RR42_RS33090	0.46	+0.3
2,831,669	+		RR42_RS33090	0.46	-1.3
2,831,669	+		RR42_RS33090	0.46	-0.4
2,831,669	+		RR42_RS33090	0.46	-1.3
2,831,670	-		RR42_RS33090	0.47	+0.1
2,831,670	-		RR42_RS33090	0.47	-0.1
2,831,944	-		RR42_RS33090	0.66	-1.3
2,832,327	+				-0.2
2,832,443	+				-0.5
2,832,443	+				-0.5
2,832,443	+				+0.8
2,832,443	+				-0.2
2,832,444	-				+0.7
2,832,700	+				+0.3
2,832,701	-				+0.4
2,832,701	-				+0.0
2,832,704	+				+0.6
2,832,704	+				+0.1
2,832,705	-				-0.3
2,832,708	-				+0.4
2,832,717	+				-0.5
2,832,748	+				+0.5
2,832,749	-				+0.7
2,832,772	+				+1.4
2,832,772	+				-1.8
2,832,773	-				-1.0
2,832,773	-				-0.0
2,832,823	+				+0.3
2,832,824	-				+0.4
2,832,824	-				-1.1
2,832,920	-		RR42_RS33095	0.19	+0.3
2,832,920	-		RR42_RS33095	0.19	+0.6
2,832,920	-		RR42_RS33095	0.19	-0.7
2,832,920	-		RR42_RS33095	0.19	+0.0
2,832,954	+		RR42_RS33095	0.23	+0.3
2,832,955	-		RR42_RS33095	0.23	+0.3
2,832,955	-		RR42_RS33095	0.23	+0.9
2,832,955	-		RR42_RS33095	0.23	+0.7
2,833,132	+		RR42_RS33095	0.42	-0.3
2,833,132	+		RR42_RS33095	0.42	+1.0
2,833,132	+		RR42_RS33095	0.42	-0.4
2,833,287	+		RR42_RS33095	0.60	+0.2
2,833,287	+		RR42_RS33095	0.60	-0.6
2,833,288	-		RR42_RS33095	0.60	-1.4
2,833,288	-		RR42_RS33095	0.60	-0.7
2,833,288	-		RR42_RS33095	0.60	-0.4
2,833,288	-		RR42_RS33095	0.60	+0.0
2,833,288	-		RR42_RS33095	0.60	+0.2
2,833,356	+		RR42_RS33095	0.67	+0.0
2,833,356	+		RR42_RS33095	0.67	-0.9
2,833,356	+		RR42_RS33095	0.67	+0.2
2,833,357	-		RR42_RS33095	0.67	+0.7
2,833,357	-		RR42_RS33095	0.67	+0.1
2,833,357	-		RR42_RS33095	0.67	+0.5
2,833,357	-		RR42_RS33095	0.67	+0.1