Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32745

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,740,523	+				-0.4
2,740,524	-				-0.4
2,741,106	-		RR42_RS32740	0.68	-3.4
2,741,413	-				-0.7
2,741,712	+		RR42_RS32745	0.20	-0.2
2,741,712	+		RR42_RS32745	0.20	-1.0
2,741,712	+		RR42_RS32745	0.20	+2.0
2,741,712	+		RR42_RS32745	0.20	+0.3
2,741,713	-		RR42_RS32745	0.20	+0.4
2,741,713	-		RR42_RS32745	0.20	+0.7
2,741,730	+		RR42_RS32745	0.22	+0.2
2,741,925	+		RR42_RS32745	0.39	+0.8
2,741,930	-		RR42_RS32745	0.39	-0.9
2,741,930	-		RR42_RS32745	0.39	-0.2
2,742,124	+		RR42_RS32745	0.56	-1.3
2,742,125	-		RR42_RS32745	0.56	-1.5
2,742,195	+		RR42_RS32745	0.62	-0.5
2,742,196	-		RR42_RS32745	0.62	-1.0
2,742,356	-		RR42_RS32745	0.76	-1.8
2,742,408	+		RR42_RS32745	0.80	-0.6
2,742,408	+		RR42_RS32745	0.80	+0.5
2,742,409	-		RR42_RS32745	0.80	+1.0
2,742,465	+		RR42_RS32745	0.85	-0.0
2,742,631	-				+0.1
2,742,631	-				-0.9
2,742,632	+				+1.1
2,742,632	+				+0.1
2,742,633	-				-1.7
2,742,633	-				-2.3
2,743,067	-		RR42_RS32750	0.24	-0.6
2,743,163	+		RR42_RS32750	0.30	+0.0
2,743,277	+		RR42_RS32750	0.37	-0.8
2,743,277	+		RR42_RS32750	0.37	-1.3
2,743,278	-		RR42_RS32750	0.37	+1.7
2,743,278	-		RR42_RS32750	0.37	-0.3
2,743,334	-		RR42_RS32750	0.40	+1.1