Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32615

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,713,284	+		RR42_RS32610	0.60	+0.5
2,713,285	-		RR42_RS32610	0.60	-1.4
2,713,285	-		RR42_RS32610	0.60	-0.6
2,713,895	+				+1.9
2,713,895	+				-1.2
2,713,895	+				+0.7
2,713,899	+				-0.8
2,713,899	+				-3.0
2,713,951	+				-1.5
2,714,049	-				-0.9
2,714,049	-				-0.2
2,714,051	+				+0.1
2,714,063	+				-1.8
2,714,063	+				+0.5
2,714,069	+				+0.1
2,714,069	+				-0.2
2,714,069	+				+0.5
2,714,069	+				-0.6
2,714,069	+				+0.1
2,714,069	+				-0.9
2,714,069	+				-0.1
2,714,070	-				+0.0
2,714,070	-				+0.6
2,714,070	-				-0.5
2,714,070	-				+1.0
2,714,070	-				-0.8
2,714,070	-				-0.5
2,714,129	+				-0.2
2,714,130	-				+0.0
2,714,144	+				+0.8
2,714,144	+				+1.3
2,714,144	+				+0.4
2,714,145	-				+0.9
2,714,178	-				+0.0
2,714,178	-				-0.5
2,714,178	-				+1.2
2,714,190	-				-0.4
2,714,190	-				-1.3
2,714,257	+				+0.0
2,714,257	+				-1.6
2,714,257	+				-0.7
2,714,258	-				-0.1
2,714,258	-				-1.0
2,714,380	+		RR42_RS32615	0.15	-0.1
2,714,431	+		RR42_RS32615	0.21	+0.5
2,714,432	-		RR42_RS32615	0.21	-0.2
2,714,432	-		RR42_RS32615	0.21	-1.6
2,714,443	-		RR42_RS32615	0.23	-0.6
2,714,443	-		RR42_RS32615	0.23	-1.5
2,714,462	-		RR42_RS32615	0.25	+0.0
2,714,527	+		RR42_RS32615	0.33	-0.3
2,714,605	+		RR42_RS32615	0.42	-0.3
2,714,605	+		RR42_RS32615	0.42	-0.5
2,714,606	-		RR42_RS32615	0.43	+1.1
2,714,606	-		RR42_RS32615	0.43	-0.3
2,714,927	-		RR42_RS32615	0.82	+1.0
2,714,927	-		RR42_RS32615	0.82	+1.0
2,714,929	+		RR42_RS32615	0.82	+1.3
2,714,929	+		RR42_RS32615	0.82	+2.1
2,714,929	+		RR42_RS32615	0.82	-0.1
2,714,930	-		RR42_RS32615	0.82	-0.2
2,714,930	-		RR42_RS32615	0.82	+0.6
2,714,930	-		RR42_RS32615	0.82	+0.9
2,714,998	+				+0.8
2,714,998	+				-0.3
2,715,062	-				+1.0
2,715,157	+				-0.4
2,715,306	+				+0.2
2,715,307	-				+0.0
2,715,526	+				-0.2
2,715,527	-				-0.3
2,715,603	+				+0.3
2,715,603	+				+0.1
2,715,603	+				-0.2
2,715,603	+				-0.4
2,715,604	-				-0.3
2,715,604	-				+0.4
2,715,604	-				+0.0
2,715,895	+		RR42_RS32620	0.16	-0.4
2,715,895	+		RR42_RS32620	0.16	-0.6
2,715,980	-		RR42_RS32620	0.21	-1.1
2,715,980	-		RR42_RS32620	0.21	-0.0
2,715,980	-		RR42_RS32620	0.21	-0.4
2,716,024	+		RR42_RS32620	0.23	-0.6
2,716,024	+		RR42_RS32620	0.23	-0.5
2,716,025	-		RR42_RS32620	0.23	+0.2
2,716,025	-		RR42_RS32620	0.23	-1.6