Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32395

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,662,225	+		RR42_RS32390	0.55	-0.0
2,662,225	+		RR42_RS32390	0.55	+0.1
2,662,226	-		RR42_RS32390	0.56	+0.5
2,662,226	-		RR42_RS32390	0.56	+0.8
2,662,345	+		RR42_RS32390	0.65	+1.0
2,662,345	+		RR42_RS32390	0.65	+1.0
2,662,345	+		RR42_RS32390	0.65	-1.3
2,662,345	+		RR42_RS32390	0.65	-0.6
2,662,345	+		RR42_RS32390	0.65	-0.6
2,662,514	-		RR42_RS32390	0.79	+1.4
2,662,514	-		RR42_RS32390	0.79	-0.7
2,662,516	+		RR42_RS32390	0.79	-0.3
2,662,516	+		RR42_RS32390	0.79	+1.9
2,662,517	-		RR42_RS32390	0.79	-1.3
2,662,557	-		RR42_RS32390	0.82	-0.8
2,662,585	+		RR42_RS32390	0.85	+0.4
2,662,586	-		RR42_RS32390	0.85	+0.9
2,662,586	-		RR42_RS32390	0.85	-0.2
2,662,726	+				-1.4
2,662,727	-				+0.4
2,662,727	-				+1.3
2,662,727	-				+1.0
2,662,764	+				-1.4
2,662,764	+				+0.1
2,662,765	-				-0.1
2,662,789	+				-1.1
2,663,149	-		RR42_RS32395	0.22	-0.7
2,663,205	+		RR42_RS32395	0.29	+0.5
2,663,335	+		RR42_RS32395	0.47	+2.0
2,663,371	+		RR42_RS32395	0.52	+0.8
2,663,371	+		RR42_RS32395	0.52	-1.2
2,663,372	-		RR42_RS32395	0.52	-0.4
2,663,372	-		RR42_RS32395	0.52	+0.3
2,663,452	+		RR42_RS32395	0.63	+0.1
2,663,452	+		RR42_RS32395	0.63	+1.3
2,663,652	+				-2.0
2,663,711	+				+0.3
2,663,711	+				-0.9
2,663,712	-				-0.6
2,663,712	-				+0.3
2,663,712	-				-0.6
2,664,249	-		RR42_RS32400	0.36	-0.3
2,664,249	-		RR42_RS32400	0.36	+1.1
2,664,286	+		RR42_RS32400	0.44	+0.5
2,664,298	+		RR42_RS32400	0.46	-0.4
2,664,298	+		RR42_RS32400	0.46	-1.1
2,664,304	+		RR42_RS32400	0.47	+0.4
2,664,319	+		RR42_RS32400	0.51	-0.5
2,664,319	+		RR42_RS32400	0.51	-0.7
2,664,341	+		RR42_RS32400	0.55	+0.1
2,664,341	+		RR42_RS32400	0.55	-0.4
2,664,342	-		RR42_RS32400	0.55	-0.1
2,664,342	-		RR42_RS32400	0.55	+1.1
2,664,342	-		RR42_RS32400	0.55	-2.8
2,664,404	-		RR42_RS32400	0.69	+1.0
2,664,451	+		RR42_RS32400	0.79	-0.6