Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32300

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,634,885	+				-0.0
2,634,885	+				+1.4
2,635,046	+				+0.7
2,635,046	+				-0.0
2,635,046	+				-1.0
2,635,135	+				+1.5
2,635,135	+				+1.4
2,635,135	+				+2.5
2,635,135	+				-0.2
2,635,135	+				-0.4
2,635,136	-				+0.1
2,635,136	-				-0.2
2,635,136	-				-2.3
2,635,320	+				-0.3
2,635,841	+				+0.7
2,635,897	+				+0.2
2,635,897	+				+0.3
2,635,898	-				-0.3
2,636,289	+		RR42_RS32300	0.44	+1.0
2,636,289	+		RR42_RS32300	0.44	-0.3
2,636,290	-		RR42_RS32300	0.44	-0.9
2,636,567	+		RR42_RS32300	0.70	+0.9
2,636,639	-		RR42_RS32300	0.77	-0.8
2,636,639	-		RR42_RS32300	0.77	-0.3
2,636,639	-		RR42_RS32300	0.77	-0.0
2,636,766	+		RR42_RS32300	0.89	+1.1
2,636,791	+				-1.3
2,636,792	-				-0.8
2,636,858	-				+1.0
2,636,923	+				-1.0
2,636,924	-				-0.5
2,637,026	+				+2.0
2,637,026	+				-1.0
2,637,027	-				-1.0
2,637,027	-				+0.7
2,637,027	-				-0.0
2,637,095	+				-0.4
2,637,096	-				-0.9
2,637,124	+				-0.5
2,637,125	-				+0.8
2,637,125	-				+0.1
2,637,198	+		RR42_RS32305	0.17	-1.2
2,637,198	+		RR42_RS32305	0.17	-0.8
2,637,199	-		RR42_RS32305	0.17	+0.4
2,637,199	-		RR42_RS32305	0.17	+1.0
2,637,199	-		RR42_RS32305	0.17	+0.5
2,637,204	-		RR42_RS32305	0.18	-0.2
2,637,230	-		RR42_RS32305	0.21	+0.3
2,637,230	-		RR42_RS32305	0.21	+0.5
2,637,242	+		RR42_RS32305	0.22	-0.1
2,637,243	-		RR42_RS32305	0.22	+0.6
2,637,243	-		RR42_RS32305	0.22	+1.3
2,637,260	+		RR42_RS32305	0.24	+0.9
2,637,270	-		RR42_RS32305	0.25	+0.1
2,637,278	-		RR42_RS32305	0.26	-0.6
2,637,340	+		RR42_RS32305	0.32	+0.0
2,637,419	-		RR42_RS32305	0.41	+0.3
2,637,551	-		RR42_RS32305	0.55	+0.1
2,637,551	-		RR42_RS32305	0.55	-0.9
2,637,662	+		RR42_RS32305	0.67	+1.0
2,637,843	+		RR42_RS32305	0.87	+0.6
2,637,843	+		RR42_RS32305	0.87	+0.1
2,637,847	+		RR42_RS32305	0.87	-0.0
2,637,848	-		RR42_RS32305	0.87	-0.2
2,637,848	-		RR42_RS32305	0.87	-0.0