Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32005

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,557,766	-		RR42_RS32000	0.50	-1.1
2,557,998	-		RR42_RS32000	0.63	-0.6
2,557,998	-		RR42_RS32000	0.63	-1.5
2,558,291	-		RR42_RS32000	0.80	-0.4
2,558,318	-		RR42_RS32000	0.81	-0.9
2,558,348	-		RR42_RS32000	0.83	+1.6
2,558,416	+		RR42_RS32000	0.87	-0.1
2,558,417	-		RR42_RS32000	0.87	+0.4
2,558,668	-				+0.6
2,558,741	+				-0.2
2,558,799	-		RR42_RS32005	0.11	+0.4
2,558,799	-		RR42_RS32005	0.11	-0.9
2,559,068	+		RR42_RS32005	0.34	-0.5
2,559,068	+		RR42_RS32005	0.34	-0.6
2,559,158	+		RR42_RS32005	0.42	-0.6
2,559,318	-		RR42_RS32005	0.55	-0.4
2,559,347	+		RR42_RS32005	0.57	+0.4
2,559,489	+		RR42_RS32005	0.69	-0.4
2,559,491	+		RR42_RS32005	0.69	+0.1
2,559,492	-		RR42_RS32005	0.70	-0.6
2,559,510	+		RR42_RS32005	0.71	-0.4
2,559,593	+		RR42_RS32005	0.78	-0.1
2,559,594	-		RR42_RS32005	0.78	-0.2
2,559,840	-				+0.3
2,559,944	+				+0.0
2,560,326	+		RR42_RS32010	0.30	-0.7
2,560,333	-		RR42_RS32010	0.31	+1.4
2,560,480	-		RR42_RS32010	0.44	-1.1
2,560,491	+		RR42_RS32010	0.45	-0.4
2,560,602	+		RR42_RS32010	0.54	-0.4
2,560,603	-		RR42_RS32010	0.54	-1.6
2,560,665	+		RR42_RS32010	0.60	-0.3