Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31780

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,505,009	+				+0.5
2,505,011	+				+0.6
2,505,011	+				-0.4
2,505,011	+				-1.2
2,505,011	+				+0.3
2,505,012	-				+0.0
2,505,012	-				-1.1
2,505,012	-				+1.1
2,505,012	-				-0.3
2,505,012	-				-0.4
2,505,012	-				+0.3
2,505,050	+				+1.9
2,505,050	+				+0.3
2,505,050	+				+1.1
2,505,050	+				+0.6
2,505,050	+				+2.7
2,505,050	+				+0.6
2,505,051	-				-0.8
2,505,051	-				-0.8
2,505,051	-				+0.0
2,505,051	-				+0.0
2,505,051	-				-1.3
2,505,142	+		RR42_RS31775	0.16	+1.2
2,505,143	-		RR42_RS31775	0.16	+0.4
2,505,166	+		RR42_RS31775	0.21	+0.6
2,505,273	-		RR42_RS31775	0.42	+0.4
2,505,412	+		RR42_RS31775	0.69	+0.6
2,505,502	+		RR42_RS31775	0.87	-1.4
2,505,503	-		RR42_RS31775	0.88	-1.4
2,505,768	-				+0.3
2,505,768	-				-0.1
2,505,770	+				+0.3
2,505,771	-				-0.0
2,505,901	+				+0.6
2,505,901	+				-0.7
2,505,901	+				-0.2
2,506,231	+		RR42_RS31780	0.24	-0.4
2,506,231	+		RR42_RS31780	0.24	+0.4
2,506,232	-		RR42_RS31780	0.24	-0.1
2,506,232	-		RR42_RS31780	0.24	-1.0
2,506,232	-		RR42_RS31780	0.24	+0.7
2,506,232	-		RR42_RS31780	0.24	+1.4
2,506,298	-		RR42_RS31780	0.29	-0.1
2,506,504	+		RR42_RS31780	0.45	-0.1
2,506,504	+		RR42_RS31780	0.45	+0.5
2,506,505	-		RR42_RS31780	0.45	+0.4
2,506,505	-		RR42_RS31780	0.45	-2.8
2,506,515	+		RR42_RS31780	0.46	-0.4
2,506,515	+		RR42_RS31780	0.46	-0.1
2,506,515	+		RR42_RS31780	0.46	+0.3
2,506,516	-		RR42_RS31780	0.46	-0.7
2,506,516	-		RR42_RS31780	0.46	+0.9
2,506,625	-		RR42_RS31780	0.54	+0.3
2,506,651	+		RR42_RS31780	0.56	+0.7
2,506,652	-		RR42_RS31780	0.56	-0.0
2,506,652	-		RR42_RS31780	0.56	-2.0
2,506,702	+		RR42_RS31780	0.60	-0.1
2,506,702	+		RR42_RS31780	0.60	+0.5
2,506,702	+		RR42_RS31780	0.60	-0.9
2,506,702	+		RR42_RS31780	0.60	-0.7
2,506,703	-		RR42_RS31780	0.60	-0.9
2,506,705	+		RR42_RS31780	0.60	+0.9
2,506,705	+		RR42_RS31780	0.60	-0.0
2,506,705	+		RR42_RS31780	0.60	-0.0
2,506,706	-		RR42_RS31780	0.60	-0.5
2,506,706	-		RR42_RS31780	0.60	+0.7
2,506,706	-		RR42_RS31780	0.60	-0.5
2,506,706	-		RR42_RS31780	0.60	+1.7
2,506,979	-		RR42_RS31780	0.81	+0.9
2,506,979	-		RR42_RS31780	0.81	-1.4
2,507,444	+				-1.7
2,507,618	+		RR42_RS31785	0.11	+0.7
2,507,618	+		RR42_RS31785	0.11	+1.5
2,507,648	+		RR42_RS31785	0.13	+0.9
2,508,141	-		RR42_RS31785	0.32	-0.4
2,508,179	+		RR42_RS31785	0.33	-0.4
2,508,179	+		RR42_RS31785	0.33	-1.3
2,508,180	-		RR42_RS31785	0.33	-0.4
2,508,180	-		RR42_RS31785	0.33	+0.6
2,508,180	-		RR42_RS31785	0.33	+0.2