Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31775

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,504,126	+		RR42_RS31765	0.75	+0.3
2,504,246	-		RR42_RS31765	0.89	-0.7
2,504,414	+		RR42_RS31770	0.12	-1.1
2,504,414	+		RR42_RS31770	0.12	+0.3
2,504,414	+		RR42_RS31770	0.12	+0.0
2,504,415	-		RR42_RS31770	0.12	-1.1
2,504,415	-		RR42_RS31770	0.12	-1.1
2,504,555	-		RR42_RS31770	0.34	-0.5
2,504,648	+		RR42_RS31770	0.49	-0.4
2,504,649	-		RR42_RS31770	0.49	-0.1
2,504,649	-		RR42_RS31770	0.49	+1.1
2,504,649	-		RR42_RS31770	0.49	-1.3
2,504,740	+		RR42_RS31770	0.63	+0.3
2,504,780	+		RR42_RS31770	0.69	+0.7
2,505,009	+				+0.5
2,505,011	+				+0.6
2,505,011	+				-0.4
2,505,011	+				-1.2
2,505,011	+				+0.3
2,505,012	-				+0.0
2,505,012	-				-1.1
2,505,012	-				+1.1
2,505,012	-				-0.3
2,505,012	-				-0.4
2,505,012	-				+0.3
2,505,050	+				+1.9
2,505,050	+				+0.3
2,505,050	+				+1.1
2,505,050	+				+0.6
2,505,050	+				+2.7
2,505,050	+				+0.6
2,505,051	-				-0.8
2,505,051	-				-0.8
2,505,051	-				+0.0
2,505,051	-				+0.0
2,505,051	-				-1.3
2,505,142	+		RR42_RS31775	0.16	+1.2
2,505,143	-		RR42_RS31775	0.16	+0.4
2,505,166	+		RR42_RS31775	0.21	+0.6
2,505,273	-		RR42_RS31775	0.42	+0.4
2,505,412	+		RR42_RS31775	0.69	+0.6
2,505,502	+		RR42_RS31775	0.87	-1.4
2,505,503	-		RR42_RS31775	0.88	-1.4
2,505,768	-				+0.3
2,505,768	-				-0.1
2,505,770	+				+0.3
2,505,771	-				-0.0
2,505,901	+				+0.6
2,505,901	+				-0.7
2,505,901	+				-0.2
2,506,231	+		RR42_RS31780	0.24	-0.4
2,506,231	+		RR42_RS31780	0.24	+0.4
2,506,232	-		RR42_RS31780	0.24	-0.1
2,506,232	-		RR42_RS31780	0.24	-1.0
2,506,232	-		RR42_RS31780	0.24	+0.7
2,506,232	-		RR42_RS31780	0.24	+1.4
2,506,298	-		RR42_RS31780	0.29	-0.1
2,506,504	+		RR42_RS31780	0.45	-0.1
2,506,504	+		RR42_RS31780	0.45	+0.5
2,506,505	-		RR42_RS31780	0.45	+0.4
2,506,505	-		RR42_RS31780	0.45	-2.8
2,506,515	+		RR42_RS31780	0.46	-0.4
2,506,515	+		RR42_RS31780	0.46	-0.1
2,506,515	+		RR42_RS31780	0.46	+0.3
2,506,516	-		RR42_RS31780	0.46	-0.7
2,506,516	-		RR42_RS31780	0.46	+0.9