Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31430

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,432,266	+				+0.8
2,432,267	-				+0.1
2,432,270	-				-1.3
2,432,270	-				+1.1
2,432,306	-				-0.4
2,432,354	+				-0.6
2,432,409	+				-0.4
2,432,592	+		RR42_RS31425	0.23	-0.5
2,433,043	+		RR42_RS31425	0.88	-0.6
2,433,049	+		RR42_RS31425	0.89	-0.1
2,433,121	+				-0.1
2,433,130	-				-0.4
2,433,144	+				-1.0
2,433,176	-				+1.9
2,433,245	+				-0.8
2,433,246	-				-0.1
2,433,373	-				-0.7
2,433,373	-				-0.2
2,433,494	-		RR42_RS31430	0.13	+0.9
2,433,701	-		RR42_RS31430	0.24	-0.6
2,433,747	+		RR42_RS31430	0.26	+0.3
2,433,848	-		RR42_RS31430	0.32	-0.3
2,433,989	-		RR42_RS31430	0.39	+0.2
2,434,043	-		RR42_RS31430	0.42	+1.2
2,434,165	+		RR42_RS31430	0.49	-0.1
2,434,294	+		RR42_RS31430	0.56	+0.5
2,434,294	+		RR42_RS31430	0.56	+0.4
2,434,294	+		RR42_RS31430	0.56	-1.4
2,434,295	-		RR42_RS31430	0.56	+0.5
2,434,463	-		RR42_RS31430	0.65	-0.9
2,434,475	-		RR42_RS31430	0.65	-2.4
2,434,528	+		RR42_RS31430	0.68	-0.7
2,434,588	+		RR42_RS31430	0.71	+1.3
2,434,588	+		RR42_RS31430	0.71	-0.4
2,434,588	+		RR42_RS31430	0.71	-0.0
2,434,610	-		RR42_RS31430	0.72	-0.3
2,434,610	-		RR42_RS31430	0.72	-0.0
2,434,610	-		RR42_RS31430	0.72	+0.1
2,434,793	-		RR42_RS31430	0.82	-1.0
2,434,795	+		RR42_RS31430	0.82	+0.0
2,434,864	+		RR42_RS31430	0.86	-0.4
2,435,194	+				-0.5
2,435,253	-		RR42_RS31435	0.23	-1.6
2,435,664	-				+0.5
2,435,761	+				-0.1
2,435,761	+				-1.4
2,435,761	+				+0.9
2,435,762	-				-0.3
2,435,762	-				+0.4
2,435,771	+				+0.2
2,435,771	+				-0.1
2,435,772	-				-0.4
2,435,813	+		RR42_RS31440	0.17	-0.4
2,435,813	+		RR42_RS31440	0.17	-0.6
2,435,813	+		RR42_RS31440	0.17	+0.3
2,435,814	-		RR42_RS31440	0.18	+0.5
2,435,814	-		RR42_RS31440	0.18	+0.6
2,435,814	-		RR42_RS31440	0.18	+0.3
2,435,814	-		RR42_RS31440	0.18	-0.6
2,435,814	-		RR42_RS31440	0.18	-1.9
2,435,814	-		RR42_RS31440	0.18	+0.3
2,435,814	-		RR42_RS31440	0.18	+0.7
2,435,814	-		RR42_RS31440	0.18	-0.4
2,436,035	-				-0.1
2,436,092	+				-0.5
2,436,093	-				+0.1
2,436,093	-				+1.6