Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31295

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,393,253	+				+0.2
2,393,253	+				-0.6
2,393,253	+				+0.3
2,393,253	+				-0.1
2,393,254	-				-0.4
2,393,254	-				-2.4
2,393,261	+				+0.2
2,393,261	+				-0.4
2,393,262	-				+0.0
2,393,262	-				+0.6
2,393,262	-				+0.2
2,393,262	-				+0.1
2,393,262	-				+0.0
2,393,262	-				-0.5
2,393,262	-				+0.9
2,393,262	-				-1.2
2,393,656	-		RR42_RS31285	0.31	+1.1
2,393,730	-				-0.4
2,393,730	-				+0.7
2,393,852	-		RR42_RS31290	0.51	+0.9
2,393,852	-		RR42_RS31290	0.51	+0.7
2,393,966	+				+3.3
2,393,967	-				+0.9
2,394,028	+				+0.9
2,394,028	+				+0.4
2,394,029	-				+1.2
2,394,049	+				+1.6
2,394,049	+				+2.5
2,394,050	-				-0.0
2,394,050	-				-0.5
2,394,050	-				-0.3
2,394,053	+				+1.7
2,394,054	-				+0.5
2,394,109	+				+1.5
2,394,109	+				+1.5
2,394,109	+				+1.6
2,394,110	-				+0.5
2,394,110	-				-1.4
2,394,110	-				-1.7
2,394,120	+				+2.3
2,394,121	-				+0.8
2,394,129	+				+1.6
2,394,129	+				+1.1
2,394,129	+				+3.3
2,394,141	-				-0.1
2,394,141	-				+0.2
2,394,178	+				-2.3
2,394,178	+				-1.2
2,394,258	+				-0.1
2,394,326	+		RR42_RS31295	0.14	+1.3
2,394,370	+		RR42_RS31295	0.21	-0.2
2,394,508	+		RR42_RS31295	0.44	+0.3
2,394,508	+		RR42_RS31295	0.44	+0.7
2,394,508	+		RR42_RS31295	0.44	+0.3
2,394,508	+		RR42_RS31295	0.44	-0.6
2,394,508	+		RR42_RS31295	0.44	-0.6
2,394,574	+		RR42_RS31295	0.55	+0.1
2,394,751	+		RR42_RS31295	0.84	+1.0
2,394,751	+		RR42_RS31295	0.84	+1.3
2,394,752	-		RR42_RS31295	0.84	-0.1
2,394,759	-		RR42_RS31295	0.85	-0.9
2,394,759	-		RR42_RS31295	0.85	-0.2
2,394,759	-		RR42_RS31295	0.85	+0.3
2,394,759	-		RR42_RS31295	0.85	-0.2
2,394,759	-		RR42_RS31295	0.85	-1.1
2,394,848	-				-0.4
2,394,848	-				-0.7
2,394,977	+				-0.6
2,395,054	-				-0.6
2,395,103	-				+0.6
2,395,537	+		RR42_RS31300	0.48	+1.3
2,395,537	+		RR42_RS31300	0.48	+1.3
2,395,538	-				-1.1
2,395,606	+		RR42_RS31300	0.55	-1.0
2,395,682	-		RR42_RS31300	0.64	-0.1