Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31010

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,337,360	+		RR42_RS31005	0.34	-0.7
2,337,399	+		RR42_RS31005	0.37	-0.1
2,337,592	+		RR42_RS31005	0.51	-1.4
2,337,592	+		RR42_RS31005	0.51	+0.5
2,337,593	-		RR42_RS31005	0.51	-0.1
2,337,867	+		RR42_RS31005	0.72	-1.4
2,337,867	+		RR42_RS31005	0.72	+0.9
2,337,868	-		RR42_RS31005	0.72	+0.4
2,337,868	-		RR42_RS31005	0.72	+0.9
2,337,904	-		RR42_RS31005	0.75	-0.6
2,338,138	+				+1.5
2,338,138	+				-0.1
2,338,216	+				-0.7
2,338,235	-				+0.1
2,338,235	-				-0.1
2,338,648	-		RR42_RS31010	0.35	-2.8
2,338,666	+		RR42_RS31010	0.37	+0.9
2,338,666	+		RR42_RS31010	0.37	-0.7
2,338,666	+		RR42_RS31010	0.37	+0.1
2,338,666	+		RR42_RS31010	0.37	+0.7
2,338,667	-		RR42_RS31010	0.37	-0.3
2,338,667	-		RR42_RS31010	0.37	-1.1
2,338,667	-		RR42_RS31010	0.37	-1.4
2,338,927	+		RR42_RS31010	0.64	+0.1
2,338,939	+		RR42_RS31010	0.66	-0.1
2,338,939	+		RR42_RS31010	0.66	+0.5
2,338,940	-		RR42_RS31010	0.66	-0.9
2,338,940	-		RR42_RS31010	0.66	-0.8
2,338,940	-		RR42_RS31010	0.66	-0.3
2,339,047	+		RR42_RS31010	0.77	+0.2
2,339,048	-		RR42_RS31010	0.77	-0.3
2,339,048	-		RR42_RS31010	0.77	-0.7
2,339,218	-				+1.3
2,339,290	+				+0.9
2,339,503	+		RR42_RS31015	0.34	+0.1
2,339,503	+		RR42_RS31015	0.34	-1.4
2,339,504	-		RR42_RS31015	0.34	-0.7
2,339,504	-		RR42_RS31015	0.34	-0.6
2,339,504	-		RR42_RS31015	0.34	+0.6
2,339,543	+		RR42_RS31015	0.41	+0.2
2,339,543	+		RR42_RS31015	0.41	-0.1
2,339,543	+		RR42_RS31015	0.41	+0.6
2,339,544	-		RR42_RS31015	0.41	+0.9
2,339,664	+		RR42_RS31015	0.60	-0.3
2,339,664	+		RR42_RS31015	0.60	+1.3
2,339,664	+		RR42_RS31015	0.60	+0.9
2,339,664	+		RR42_RS31015	0.60	-0.5
2,339,664	+		RR42_RS31015	0.60	-0.4
2,339,665	-		RR42_RS31015	0.60	-2.4
2,339,806	+		RR42_RS31015	0.82	-1.0
2,339,806	+		RR42_RS31015	0.82	-1.4
2,339,810	+		RR42_RS31015	0.83	+0.9
2,339,810	+		RR42_RS31015	0.83	-0.2
2,339,811	-		RR42_RS31015	0.83	-1.0
2,339,811	-		RR42_RS31015	0.83	-2.1
2,339,924	-				-0.1
2,339,938	-				-0.3
2,339,938	-				-0.3
2,339,938	-				-0.4
2,339,938	-				+0.5
2,339,938	-				+0.2
2,340,220	+		RR42_RS31020	0.68	-0.0
2,340,220	+		RR42_RS31020	0.68	+0.3
2,340,220	+		RR42_RS31020	0.68	+0.4
2,340,221	-		RR42_RS31020	0.68	-1.1
2,340,221	-		RR42_RS31020	0.68	+0.3