Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30805

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,288,708	+		RR42_RS30800	0.49	-1.1
2,288,708	+		RR42_RS30800	0.49	-0.6
2,288,709	-		RR42_RS30800	0.49	+0.2
2,289,052	-		RR42_RS30800	0.71	-0.6
2,289,357	+		RR42_RS30800	0.90	-0.1
2,289,357	+		RR42_RS30800	0.90	-0.7
2,289,358	-		RR42_RS30800	0.90	+0.4
2,289,358	-		RR42_RS30800	0.90	+0.2
2,289,358	-		RR42_RS30800	0.90	-0.1
2,289,358	-		RR42_RS30800	0.90	+0.3
2,289,358	-		RR42_RS30800	0.90	-0.7
2,289,451	+				+0.2
2,289,451	+				+3.5
2,289,487	+				-0.9
2,289,487	+				+0.9
2,289,488	-				+0.3
2,289,508	+				-0.2
2,289,508	+				-0.1
2,289,515	-				-0.9
2,289,734	+		RR42_RS30805	0.11	+0.3
2,289,800	-		RR42_RS30805	0.17	+0.9
2,289,891	-		RR42_RS30805	0.26	-0.7
2,290,210	+		RR42_RS30805	0.58	+1.1
2,290,210	+		RR42_RS30805	0.58	+0.5
2,290,228	+		RR42_RS30805	0.60	+0.7
2,290,228	+		RR42_RS30805	0.60	+1.5
2,290,228	+		RR42_RS30805	0.60	+1.4
2,290,228	+		RR42_RS30805	0.60	-1.6
2,290,228	+		RR42_RS30805	0.60	+0.3
2,290,229	-		RR42_RS30805	0.60	-0.3
2,290,229	-		RR42_RS30805	0.60	-0.7
2,290,229	-		RR42_RS30805	0.60	-0.4
2,290,229	-		RR42_RS30805	0.60	-0.9
2,290,229	-		RR42_RS30805	0.60	-0.7
2,290,229	-		RR42_RS30805	0.60	+0.0
2,290,251	-		RR42_RS30805	0.62	-0.4
2,290,300	+		RR42_RS30805	0.67	+0.4
2,290,399	+		RR42_RS30805	0.77	-0.2
2,290,400	-		RR42_RS30805	0.77	+0.8
2,290,432	+		RR42_RS30805	0.80	+0.7
2,290,432	+		RR42_RS30805	0.80	+0.2
2,290,432	+		RR42_RS30805	0.80	+0.4
2,290,432	+		RR42_RS30805	0.80	-1.3
2,290,433	-		RR42_RS30805	0.80	+0.3
2,290,433	-		RR42_RS30805	0.80	-0.4
2,290,433	-		RR42_RS30805	0.80	+0.1
2,290,433	-		RR42_RS30805	0.80	-0.3
2,290,513	+		RR42_RS30805	0.88	+0.5
2,290,514	-		RR42_RS30805	0.88	+0.4
2,290,619	+				-0.6
2,290,619	+				-1.0
2,290,658	-				+0.5
2,290,658	-				+0.3
2,290,737	-		RR42_RS30810	0.16	+0.7
2,290,737	-		RR42_RS30810	0.16	+0.4
2,290,799	+		RR42_RS30810	0.24	+0.3
2,290,799	+		RR42_RS30810	0.24	+0.4
2,290,799	+		RR42_RS30810	0.24	+0.9
2,291,027	+		RR42_RS30810	0.56	+3.0
2,291,027	+		RR42_RS30810	0.56	-1.0
2,291,028	-		RR42_RS30810	0.56	-0.4
2,291,028	-		RR42_RS30810	0.56	+0.5
2,291,028	-		RR42_RS30810	0.56	+0.7
2,291,100	+		RR42_RS30810	0.66	-2.5
2,291,100	+		RR42_RS30810	0.66	+0.3
2,291,144	+		RR42_RS30810	0.73	-0.3
2,291,145	-		RR42_RS30810	0.73	+2.9
2,291,145	-		RR42_RS30810	0.73	+2.7
2,291,147	+		RR42_RS30810	0.73	-0.5
2,291,147	+		RR42_RS30810	0.73	+0.5
2,291,148	-		RR42_RS30810	0.73	-1.1
2,291,148	-		RR42_RS30810	0.73	+0.3
2,291,231	+		RR42_RS30810	0.85	+0.3
2,291,232	-		RR42_RS30810	0.85	+0.2
2,291,393	-				+0.9
2,291,393	-				-0.3
2,291,440	-		RR42_RS30815	0.15	-2.5
2,291,500	+		RR42_RS30815	0.24	+0.4
2,291,501	-		RR42_RS30815	0.24	+0.1
2,291,501	-		RR42_RS30815	0.24	+0.5
2,291,626	+		RR42_RS30815	0.43	+0.3
2,291,627	-		RR42_RS30815	0.43	-0.0