Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30400

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,195,689	+		RR42_RS30395	0.46	-0.2
2,195,689	+		RR42_RS30395	0.46	+0.4
2,195,690	-		RR42_RS30395	0.46	+0.9
2,195,690	-		RR42_RS30395	0.46	+0.9
2,195,690	-		RR42_RS30395	0.46	-0.9
2,195,872	+		RR42_RS30395	0.61	+1.5
2,195,872	+		RR42_RS30395	0.61	+0.9
2,195,872	+		RR42_RS30395	0.61	+0.7
2,195,873	-		RR42_RS30395	0.61	+0.2
2,195,893	+		RR42_RS30395	0.62	+0.3
2,195,894	-		RR42_RS30395	0.62	-0.7
2,196,202	+		RR42_RS30395	0.87	+0.2
2,196,202	+		RR42_RS30395	0.87	+0.1
2,196,203	-		RR42_RS30395	0.87	+0.1
2,196,308	-				+0.0
2,196,319	+				-0.1
2,196,320	-				+0.6
2,196,320	-				+0.9
2,196,320	-				-0.2
2,196,330	+				+0.2
2,196,330	+				+0.3
2,196,330	+				+0.3
2,196,330	+				+0.9
2,196,331	-				-0.2
2,196,447	+				+1.5
2,196,447	+				+0.5
2,196,448	-				-1.1
2,196,448	-				+0.5
2,196,448	-				-0.8
2,196,634	+				+0.6
2,196,634	+				-0.5
2,196,634	+				-0.2
2,196,679	+				-0.4
2,196,680	-				-0.1
2,196,862	+		RR42_RS30400	0.19	+0.6
2,196,862	+		RR42_RS30400	0.19	-0.1
2,196,862	+		RR42_RS30400	0.19	-0.7
2,196,862	+		RR42_RS30400	0.19	-1.3
2,196,863	-		RR42_RS30400	0.19	-0.7
2,196,863	-		RR42_RS30400	0.19	+0.1
2,196,864	+		RR42_RS30400	0.19	-0.4
2,196,931	+		RR42_RS30400	0.24	-0.9
2,196,931	+		RR42_RS30400	0.24	+0.7
2,196,931	+		RR42_RS30400	0.24	-0.9
2,196,932	-		RR42_RS30400	0.24	-0.4
2,196,932	-		RR42_RS30400	0.24	-0.4
2,196,932	-		RR42_RS30400	0.24	-1.6
2,197,073	-		RR42_RS30400	0.36	+0.1
2,197,073	-		RR42_RS30400	0.36	-1.5
2,197,073	-		RR42_RS30400	0.36	+0.1
2,197,073	-		RR42_RS30400	0.36	+0.1
2,197,096	+		RR42_RS30400	0.38	+1.2
2,197,097	-		RR42_RS30400	0.38	+0.4
2,197,097	-		RR42_RS30400	0.38	-0.5
2,197,285	+		RR42_RS30400	0.53	-0.6
2,197,286	-		RR42_RS30400	0.53	+0.1
2,197,286	-		RR42_RS30400	0.53	-0.1
2,197,657	+		RR42_RS30400	0.84	+0.1
2,197,658	-		RR42_RS30400	0.84	+0.0
2,197,760	-				+1.1
2,197,956	+				+0.9
2,197,957	-				+1.4
2,198,012	+				-1.8
2,198,013	-				+0.6
2,198,178	+		RR42_RS30405	0.21	-1.5
2,198,178	+		RR42_RS30405	0.21	-0.7
2,198,178	+		RR42_RS30405	0.21	+2.9
2,198,178	+		RR42_RS30405	0.21	+1.1
2,198,178	+		RR42_RS30405	0.21	-1.2
2,198,179	-		RR42_RS30405	0.21	-0.9
2,198,179	-		RR42_RS30405	0.21	-0.1
2,198,179	-		RR42_RS30405	0.21	+0.8
2,198,179	-		RR42_RS30405	0.21	+0.5
2,198,408	+		RR42_RS30405	0.53	+0.0
2,198,453	+		RR42_RS30405	0.59	+1.1
2,198,454	-		RR42_RS30405	0.59	-0.8
2,198,454	-		RR42_RS30405	0.59	+0.2
2,198,522	+		RR42_RS30405	0.69	-0.0
2,198,522	+		RR42_RS30405	0.69	-0.1
2,198,523	-		RR42_RS30405	0.69	-0.6
2,198,523	-		RR42_RS30405	0.69	-0.3
2,198,747	+				-1.3
2,198,747	+				-1.5
2,198,848	-				-0.5