Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30170

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,141,924	+		RR42_RS30165	0.33	-0.3
2,141,924	+		RR42_RS30165	0.33	+1.5
2,141,925	-		RR42_RS30165	0.34	+0.9
2,141,925	-		RR42_RS30165	0.34	+1.1
2,142,029	+		RR42_RS30165	0.42	+0.3
2,142,029	+		RR42_RS30165	0.42	+0.4
2,142,030	-		RR42_RS30165	0.42	-0.4
2,142,054	+		RR42_RS30165	0.44	+0.7
2,142,055	-		RR42_RS30165	0.44	+0.1
2,142,143	+		RR42_RS30165	0.52	-0.0
2,142,144	-		RR42_RS30165	0.52	+0.4
2,142,182	+		RR42_RS30165	0.55	-0.1
2,142,294	-		RR42_RS30165	0.64	+0.7
2,142,294	-		RR42_RS30165	0.64	-0.5
2,142,294	-		RR42_RS30165	0.64	+0.2
2,142,294	-		RR42_RS30165	0.64	+0.1
2,142,512	-		RR42_RS30165	0.83	+1.4
2,142,626	+				+0.1
2,142,626	+				+0.0
2,142,626	+				-1.1
2,142,627	-				-1.5
2,142,627	-				+0.6
2,142,627	-				+1.0
2,142,627	-				+0.6
2,142,705	-				+0.9
2,142,705	-				-0.2
2,142,705	-				-0.2
2,142,709	-				-0.5
2,142,709	-				-1.7
2,142,709	-				-1.5
2,142,730	+				+1.1
2,142,730	+				+1.5
2,142,733	+				+0.0
2,142,734	-				+1.9
2,142,734	-				-0.1
2,142,845	+				+0.7
2,142,846	-				-0.7
2,142,846	-				-1.3
2,143,034	+		RR42_RS30170	0.25	-1.7
2,143,034	+		RR42_RS30170	0.25	+0.6
2,143,035	-		RR42_RS30170	0.25	-0.3
2,143,035	-		RR42_RS30170	0.25	+0.5
2,143,035	-		RR42_RS30170	0.25	+0.3
2,143,266	+		RR42_RS30170	0.55	+0.1
2,143,272	+		RR42_RS30170	0.56	-1.7
2,143,272	+		RR42_RS30170	0.56	-0.8
2,143,600	-				+0.9
2,143,630	+				-0.6
2,143,731	+				+0.9
2,143,793	+				+0.2
2,143,793	+				+0.7
2,143,793	+				+0.4
2,143,794	-				-0.2
2,143,915	+				+1.6
2,144,045	-		RR42_RS30175	0.13	-0.0
2,144,118	+		RR42_RS30175	0.17	-0.3
2,144,118	+		RR42_RS30175	0.17	+0.2
2,144,118	+		RR42_RS30175	0.17	-1.9
2,144,118	+		RR42_RS30175	0.17	-0.9
2,144,119	-		RR42_RS30175	0.17	-0.9
2,144,202	+		RR42_RS30175	0.21	-0.1
2,144,323	+		RR42_RS30175	0.26	+0.4
2,144,539	-		RR42_RS30175	0.36	-0.6